Pseudomonas putida ND6: YSA_04422
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Entry
YSA_04422 CDS
T02170
Name
(GenBank) dinucleoside polyphosphate hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YSA_04422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppi03019
]
YSA_04422
Messenger RNA biogenesis [BR:
ppi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
YSA_04422
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AFK69163
UniProt:
I3UUJ2
LinkDB
All DBs
Position
complement(2400556..2401095)
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AA seq
179 aa
AA seq
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MLRSQALWNNALTCVCEVAAVIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGI
NPDETPEDALYRELNEEVGLERDDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWF
LLRLLSNEQRVRMDLTGKPEFDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcgctcgcaagctttgtggaacaatgcgttgacatgcgtttgcgaggttgctgcc
gtgatcgacccggatggttttcgccccaatgtcgggatcattctcacgaatgatgccggg
caggtgctatgggctcgacggatcaaccaggatgcctggcaattcccccagggtggtatc
aaccctgacgagacgccggaagacgccctgtaccgcgagctgaacgaagaagttggcctt
gaacgcgacgatgtagaaattcttgcctgcacccgtggctggttgcgttatcgtttaccc
cagcgattggtacgtacccacagccagccgctgtgcattggccagaagcagaagtggttc
ctgctgcgcctgttgagcaacgaacaacgggtgcggatggacctgaccggcaagccggaa
ttcgacggttggcgctgggtgagctattggtatccgctgggccaggttgtgacattcaag
cgcgaggtgtaccggcgcgccctgaaagagctagcaccgcgtctgttgacgcgcgactga
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