Pseudomonas putida ND6: YSA_04928
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Entry
YSA_04928 CDS
T02170
Name
(GenBank) pyruvate carboxylase subunit B
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00020
Citrate cycle (TCA cycle)
ppi00620
Pyruvate metabolism
ppi00720
Other carbon fixation pathways
ppi01100
Metabolic pathways
ppi01120
Microbial metabolism in diverse environments
ppi01200
Carbon metabolism
ppi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YSA_04928
00620 Pyruvate metabolism
YSA_04928
09102 Energy metabolism
00720 Other carbon fixation pathways
YSA_04928
Enzymes [BR:
ppi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
YSA_04928
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
RnfC_N
NQRA_N
QRPTase_N
HlyD_D23
GCV_H
53-BP1_Tudor
Motif
Other DBs
NCBI-ProteinID:
AFK69437
UniProt:
I3UVB6
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Position
complement(2666604..2668412)
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AA seq
602 aa
AA seq
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MSKKIHVTDTILRDAHQSLLATRMRTEDMLPICDKLDKVGYWSLEVWGGATFDACVRFLK
EDPWERLRKLRAALPNTRLQMLLRGQNLLGYRHYSDDVVKAFVAKAAVNGIDVFRIFDAM
NDVRNLRVAIEAVKAAGKHAQGTIAYTTSPVHTIEAFVNQAKQMEAMGCDSVAIKDMAGL
LTPFATGELVKALKAEQSLPVFIHSHDTAGLAAMCQLKAVENGADHIDTAISSFAWGTSH
PGTESMVAALKGSEFDTGLDLELLQEIGLYFYAVRKKYHQFESEFTAVDTRVQVNQVPGG
MISNLANQLKEQGALNRMNEVLAEIPRVREDLGFPPLVTPTSQIVGTQAFFNVLAGERYK
TITNEVKLYLQGGYGKAPGVVNEQLRRQAIGSEEVIDVRPADLLKPEMAKLRSDIGALAR
CEEDVLTFAMFPDIGRKFLEEREAGTLTPEILLPIPEAGAVAAPGGEGVPTEFVIDVHGE
TYRVDITGVGVKAEGKRHFYLSIDGMPEEVVFEPLNEFVSGGGSKRKQATDPGHVSTTMP
GNIVDVLVKEGDMVKAGQAVLITEAMKMETEVQAAIAGKVVAIHVAKGDRVTPGEILIEI
EG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaaattcacgtaaccgacacgatcctgcgcgacgctcaccagtcactgctg
gctacccgcatgcgtaccgaagacatgctgccgatctgcgacaagctcgacaaggttggc
tactggtcgctggaagtctggggtggtgccaccttcgacgcctgcgtgcgcttcctcaag
gaagacccgtgggagcgcctgcgcaagctgcgcgcagcgctgccaaacacccgcctgcaa
atgctgctgcgcggccagaacctgttgggctaccgccactacagcgacgacgtggtcaag
gccttcgtcgccaaggcggcagtcaacggtatcgatgtgttccgcattttcgacgccatg
aacgacgtgcgtaacctgcgcgtggccatcgaagcggtcaaggccgccggcaagcacgcc
cagggcactatcgcttacaccaccagcccggtacacaccatcgaagccttcgtgaaccag
gccaagcagatggaagccatgggttgcgactcggtggcgatcaaggacatggctggcctg
ttgaccccgttcgccactggcgagctggtcaaggcgctgaaggctgaacagtcgctgccg
gtgttcatccactctcacgataccgccggcctggctgccatgtgccagctcaaagctgtg
gaaaatggcgcggaccacatcgataccgccatctccagcttcgcctggggcaccagccat
ccgggtaccgagtcgatggttgctgcgctcaagggcagcgagttcgacaccggcctggac
ctggagcttctgcaggagatcggcttgtacttctacgccgtgcgcaagaagtaccaccag
ttcgaaagcgagttcaccgcggtggacacccgggtgcaggtgaaccaggtaccgggcggc
atgatttccaacctggccaaccagctcaaggagcagggcgccctcaaccgcatgaacgaa
gtgctggccgaaatcccgcgtgtgcgtgaggacctcggcttcccaccgctggtcaccccg
acctcgcagatcgtcggcacccaggccttcttcaacgtgctggcgggtgagcgctacaag
accatcaccaatgaggtgaagctgtacctgcaaggtggctatggcaaggccccgggtgtg
gtcaacgagcaactgcgtcgccaggctatcggcagcgaagaagtgatcgatgtgcgcccg
gctgacctgttgaagccggaaatggccaagttgcgtagcgacatcggtgccctggcccgt
tgcgaagaagacgtgctgaccttcgccatgttcccggacattggccgcaaattcctcgaa
gaacgcgaagctggcacgctgacgcctgaaattctgctgccaattccggaagccggtgcc
gtggctgcccctggcggtgaaggcgtgccgaccgagttcgtcatcgacgtacacggcgaa
acctaccgcgtcgatatcaccggtgtgggcgttaaagccgaaggcaagcgtcacttctat
ctgtcgatcgacggcatgccggaggaagtggtcttcgagccactcaacgagttcgtcagc
ggtggcggcagcaagcgcaagcaagcgaccgaccctggccacgtaagcaccaccatgccg
gggaacatcgttgatgtgctggtcaaggaaggtgacatggtcaaggccggccaggcggtc
ttgatcaccgaagccatgaagatggaaaccgaagtgcaggcggccatcgccggtaaggtt
gtggccatccatgtggccaagggtgatcgcgtgacgccgggtgaaatcctgatcgagatc
gagggctga
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