Pseudomonas putida ND6: YSA_04936
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Entry
YSA_04936 CDS
T02170
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppi03000
]
YSA_04936
Transcription factors [BR:
ppi03000
]
Prokaryotic type
Helix-turn-helix
Other families
YSA_04936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Mce4_CUP1
Motif
Other DBs
NCBI-ProteinID:
AFK69440
LinkDB
All DBs
Position
complement(2671359..2672225)
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREHLDPQALQQ
AVSAMAQAQRVEFYGFGASGAVAADAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAV
CISQSGRSKDLLITANLVRESGANLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSIKATDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgttgcaacatatcgcccaatcgcgccacctgctgcgcaaatcggaactgaaa
gtggccgaccacgtgctgctcgacccggctgccgtcatgcacagctccatggccgatttg
gcgcacagcgtgggtatcagtgagccgaccatcgtgcgtttctgccgggccataggctgc
tcgggcttccaggacctgaagctgaagctggcgcaaagcctggctgccggggccagcttc
ggccagttcgctatccacgaagacgattcggtcgccgactacagtctgaagatcttcgac
accaccctgcacaccctgatggaagtgcgcgagcaccttgatccgcaagcactgcaacaa
gccgtgagcgccatggcccaggcgcaacgggtagagttttatggctttggcgcgtccggt
gccgttgcggccgatgcccagcacaagttcttccgcctgctgctcagcgcggcagcgtat
tccgacccccacatgcaagcgatgtcggccgttaccctgaaaccgggtgatgtggcggtg
tgtatttcccaatcgggccgttccaaggacctgctgatcactgccaacctggtccgtgag
agcggcgccaacctgattaccctgtgccccagccagacgccgctggccgagctatcgacg
gtcaacctggcgatcgacgtgcatgaagacaccgagatctacaccccactgacttcgcgt
attgcccacctggtggtgatcgacgtgctggccatgggcgttgccatggcgcgcgggcct
agcctggtcaaccacctgaagagcgtgaaacgcagcctgcgcagcttgcgtctgtcgccc
aagtcgatcaaggctaccgacgactga
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