KEGG   Pseudomonas putida ND6: YSA_05532
Entry
YSA_05532         CDS       T02170                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
ppi  Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppi03000]
    YSA_05532
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppi02048]
    YSA_05532
Transcription factors [BR:ppi03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    YSA_05532
Prokaryotic defense system [BR:ppi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    YSA_05532
SSDB
Motif
Pfam: HTH_3
Other DBs
NCBI-ProteinID: AFK69763
UniProt: I3UW92
LinkDB
Position
2990908..2991447
AA seq 179 aa
MVQKRYQVATWAARYFNSTGDNMKRDKIEANGLDAFIANISPMLDGLNTQMATMAQLLAA
CHDPIKDDAELEARMALIDELYSHADSEGHAAARFAEMVADRVYEYESESVLVPFASQAE
ALAFLLSDRGVKQKDLSAIATQSAVSEILNNKRKMTVAQIKGFAEFFSVPVEFFMHGVV
NT seq 540 nt   +upstreamnt  +downstreamnt
atggtgcagaagcgatatcaggtagcaacctgggccgcgcgatatttcaattcgacaggt
gacaacatgaagcgggataaaatcgaagccaatggactagatgccttcatcgctaatatt
tcacccatgctcgatggcctgaacactcagatggcaaccatggcccagcttctagccgcc
tgccatgaccccatcaaggacgatgccgagcttgaggcacgcatggcattgatcgacgag
ctctactcccatgcggacagcgaaggccacgctgcggcacgctttgccgagatggtagcg
gaccgcgtctacgagtatgagagtgagtctgtattggtgccgttcgcgagccaggccgaa
gcgttggcctttctgctgtcggacaggggcgtgaagcagaaggacctgtcggcgatagcg
acccagagcgcggtatccgagattctgaacaacaagcggaagatgacggttgcccagata
aagggctttgctgagtttttcagcgtaccggttgagttcttcatgcatggggtggtttga

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