Pseudomonas putida ND6: YSA_06069
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Entry
YSA_06069 CDS
T02170
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YSA_06069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_06069
Enzymes [BR:
ppi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
YSA_06069
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
YSA_06069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
AFK70054
UniProt:
I3UX33
LinkDB
All DBs
Position
complement(3282003..3282245)
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AA seq
80 aa
AA seq
DB search
MARKKASLDFEQSLADLQALVERLENGELSLEESLAAFEQGIALTRDCQGALAQAEQKVQ
ILLERDGELAAQPFDAEPEA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagcctccctcgatttcgagcaatccctcgcagacctgcaagcactg
gtcgagcgcctggagaacggcgagttgtcgctggaagagtcgctggccgcctttgaacaa
ggcatcgccctgacccgtgactgccagggcgccctggcccaggccgaacagaaggtgcaa
attctgctggagcgcgacggtgaactggctgcccagcccttcgacgcggagccggaagca
tga
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