Pseudomonas putida ND6: YSA_06545
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Entry
YSA_06545 CDS
T02170
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_06545
Enzymes [BR:
ppi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
YSA_06545
DNA repair and recombination proteins [BR:
ppi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
YSA_06545
Prokaryotic type
YSA_06545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFK70298
UniProt:
I3UXS7
LinkDB
All DBs
Position
complement(3521236..3522663)
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AA seq
475 aa
AA seq
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MHLTWLRSDLRIDDNTALSASTERGPTIALWLVSPGQWQAHDDAACKVDFWLRNLHDLRQ
SLEKLNIPLLIRTIDTWDQAPQAVLDVCRQHQVQSVHWNEEYGINEQRRDDATRALLEKS
AIQAHSYLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVKRQSPLNIG
SDPIPQHVEGFGKTTHALRDHWPAGEAEAQSRLSRFLDETIDDYQHLRDLPAKPGTSQLS
PYLAAGVISPRQCLHGALASNRGEFDSGSMGVQTWINELLWREFYKHILSGYPQVSRHRA
FRAQTEALPWRDAPADLEAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMIVAMFLSKNLL
IDWRKGERHFMRNLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQGHFIR
HWVPELQALDEKAIHQPIKSTDLFGNTSYLSPIVDLSSSRQRALEAFKGLPRRQN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacctggctgcgcagcgacctgcgtatcgatgacaacactgcactcagcgcc
tccaccgagcgcggcccgaccatcgccctgtggctggtcagccccggacaatggcaagcc
catgacgatgccgcctgcaaagtcgacttctggctgcgtaacctgcatgacctgcgccaa
tcactggaaaagctgaacatccccctgctgatccgcacaatcgatacctgggaccaggcg
ccacaggcggtgctcgatgtctgtcgccaacatcaggtgcaaagcgtgcactggaacgag
gagtacggcatcaatgagcagcgccgggatgatgccacccgggcactgctggaaaagtcg
gccatccaggcgcacagctacctcgaccagctgttcttccgtccgggcaccgtactgact
cgcagtggcgattacttccaggtgttcagccagttcaagaaaacctgcctggagcatctg
caccgcagcctgccggccctggcacggcgggtgaagcgccagtccccgctgaacatcggc
agcgacccgatcccgcaacacgtagagggattcggaaaaaccacgcacgcactgcgcgac
cactggccagcaggtgaggctgaggcacagtcccgtctgtcacgcttcctcgacgaaacc
atcgacgactaccagcacttgcgtgatttgccagccaagcccggcaccagccagctttcc
ccctacctggccgccggcgtgatttcgccccgccaatgcttgcacggtgcactggccagc
aaccggggcgagttcgacagtggcagcatgggcgtgcagacctggataaacgagctactc
tggcgggagttctacaagcacatcctgagcggttatccacaggtctcgcgccaccgcgcc
ttccgcgcccagaccgaagccttgccctggcgtgacgccccggcagacctggaggcctgg
gagcagggccgcaccggcttcccgatcatcgatgccgccatgcgccagttgctgcacacc
gggtggatgcacaaccgcttgcgcatgatcgtggccatgttcctcagcaagaacctgctg
attgactggcgcaagggcgagcgacacttcatgcgaaacctgatagacggcgatctggcc
gccaacaacgggggttggcagtggagtgcgtccaccggcaccgatgcggtgccctatttc
cgtatcttcaacccggtttcgcagtcgcagcgcttcgatcctcaggggcatttcattcgc
cactgggtaccagaactacaagcactcgatgaaaaagccatccatcagcccattaaatcg
acggaccttttcggtaatacttcttacctaagtccaatcgtagatctcagcagcagtcgc
cagcgggccctggaagcgttcaaagggctgccacgccggcagaattag
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