Pseudomonas putida ND6: YSA_07841
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Entry
YSA_07841 CDS
T02170
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppi03009
]
YSA_07841
Enzymes [BR:
ppi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YSA_07841
Ribosome biogenesis [BR:
ppi03009
]
Prokaryotic type
rRNA helicases
YSA_07841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFK71011
UniProt:
I3UZU0
LinkDB
All DBs
Position
4232193..4233554
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AA seq
453 aa
AA seq
DB search
MQLNFPHLSEVTSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTG
SGKTAAFVLPLLNRLVDLSGPRVEIRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTG
GEDFKEQAAMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDME
RLCKECENREQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHD
QHKEQIAQWLLANETFDKAIIFTNTRAMADRIYGHLVAKDVKAFVLHGEKDQKDRKLAIE
RFKQGSSKVLVATDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLI
THNDWNLMSSIERYLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKTGDKKA
AAKRKPTAKPKANAPLASADGLAPLKKRKPAAE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaatttcccgcacttgtctgaggttacctccgtgttctcccaattcgccctg
catgaacgcctgcttaaagccgtggccgagcttaaatttgtcgagccaaccccggtgcag
gccgcggccatccccctggccctgcaagggcgggatctgcgtgtgactgcgcagaccggc
agcggcaagacggcggccttcgtactgccactgctcaaccgtctggtcgacctcagcggt
ccgcgtgtcgagattcgcgcgttgatcctgctgccgacccgtgagctggcccagcaaacc
ctcaagcaggtgcagctgttctcgcagttcacctacatcaagtcgggcctggtgactggc
ggcgaagacttcaaggaacaggccgccatgctgcgcaaggtgcccgacgtgctgatcggc
accccgggtcgcctgctcgagcagctcaatgccggcaacctcgacctgtcccacgtgcag
gtcctgatcctggacgaagccgaccgcatgctcgacatgggctttgccgaagacatggag
cgcctgtgcaaagagtgcgagaaccgcgagcagaccttgctgttctcggctaccaccggt
ggtgcggccctgcgcgacatcatcggcaaggtgctgaaagaccctgaacacctgatgctc
aacagtgtctcgcaactggctgaaggcacccgccagcagatcattaccgccgaccacgac
cagcataaagagcagatcgcgcagtggttgctggccaacgaaaccttcgacaaggcgatc
atcttcaccaacacccgcgccatggccgaccgcatctacggtcacctggtggccaaggac
gtgaaggctttcgtgctgcatggcgaaaaggaccagaaggaccgcaagctggccatcgag
cgcttcaagcagggcagctccaaagtgctggtggcgaccgacgtggcagcccgtggcctg
gatatcgacggcctggacctggtgatcaacttcgacatgccacgcagcggtgacgagtac
gtacaccgtgtgggccgtaccggccgtgccggtggcgaaggcctggcgatctcgttgatc
acccacaacgactggaacctgatgtcgagcatcgagcgctacctcaagcagcagttcgag
cgccgggtcatcaaggaagtgaagggcacctacaacgggccgaagaaggtcaaggcctcg
ggcaaggcggccggcagcaagaagaaaaaggtcgagaagaagaccggcgacaagaaagct
gccgccaagcgcaagcctactgccaagccgaaggccaacgcgcctctggccagtgcagat
ggcctcgcaccgctgaagaagcgcaagcctgctgctgaataa
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