Pseudomonas putida ND6: YSA_07906
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Entry
YSA_07906 CDS
T02170
Name
(GenBank) RNA-binding S4 domain-containing protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppi03009
]
YSA_07906
Enzymes [BR:
ppi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
YSA_07906
Ribosome biogenesis [BR:
ppi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YSA_07906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AFK71052
UniProt:
I3UZY1
LinkDB
All DBs
Position
4266813..4267880
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AA seq
355 aa
AA seq
DB search
MSEQDLKETEITPPSGEKLQKVLARIGVGSRRDVEAWISQGRIKVNGVEATLGQRVDLHD
AIAVDGKLIKREEAAEATRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGR
LDINTTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVMLEDGPAK
FTDIQKAPGGEGFNHWYHCVVMEGRNREVRRLWESQGMVVSRLKRVRFGPVFLNSDLPMG
RWREMTQGEIDILAAEVGLQPVALPAMKLKAKDKMERLQRKSTRPLGRGERVRNLRPAHE
GAATGERPARQPREEAPRKPTRGSTVAERPSEMRKRPGKPDGDKPAGRGRGKPRG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcaagacctgaaagaaaccgaaatcaccccgccatccggcgaaaagctgcag
aaagtgctggcgcgcattggcgtgggctcgcggcgtgatgtcgaggcctggatcagccag
gggcgcatcaaggtcaacggcgtcgaggccacccttggccagcgcgtagacctgcacgac
gccatcgccgtggacggcaagctgatcaagcgcgaggaggccgccgaggccacccgccgg
gtgatcatgtacaacaagcccgacggcgaaatctgcacccgtgacgacccggaagggcgc
ccgaccgtgttcgaccgtttgccacggccaaaagaaggccgctggatcaacatcggccgc
ctcgacatcaacaccactggcttgctgctgttcaccaccgacggtgagctggccaaccgc
ctgatgcacccgtcctacgagatggaccgtgagtacgcggtacgtgtgcgtggtgaagtc
gacgacgagatgatcgagcgcctgaaagccggcgtaatgctggaggacggcccggccaag
ttcaccgatatccagaaggcaccgggtggcgaaggcttcaaccactggtaccactgcgtg
gtgatggaaggtcgtaaccgtgaggtgcgtcgcctgtgggaatcccagggcatggtggtc
agccgcctgaagcgtgtgcgtttcggcccggtgttcctcaattcggacctgccgatgggc
cgctggcgcgaaatgacccagggcgaaatcgacatcctcgccgccgaagtgggcttgcag
ccggtcgcgctgccagccatgaagctcaaggccaaggacaagatggagcgcctgcagcgc
aagtcgacccgcccgctgggccgtggcgagcgcgtgcgcaacctgcgcccggcccacgaa
ggtgccgctactggcgaacgccctgcgcgtcagccgcgtgaagaagcgccgcgtaaaccc
acccgtggcagcacggtggctgagcgcccgagcgagatgcgcaagcgtccgggcaaacct
gatggcgacaagccggcaggccgtggtcgcggcaagccgcgtggctga
DBGET
integrated database retrieval system
