Pseudomonas putida ND6: YSA_07988
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Entry
YSA_07988 CDS
T02170
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00010
Glycolysis / Gluconeogenesis
ppi00020
Citrate cycle (TCA cycle)
ppi00260
Glycine, serine and threonine metabolism
ppi00280
Valine, leucine and isoleucine degradation
ppi00310
Lysine degradation
ppi00380
Tryptophan metabolism
ppi00620
Pyruvate metabolism
ppi00630
Glyoxylate and dicarboxylate metabolism
ppi00640
Propanoate metabolism
ppi00670
One carbon pool by folate
ppi00785
Lipoic acid metabolism
ppi01100
Metabolic pathways
ppi01110
Biosynthesis of secondary metabolites
ppi01120
Microbial metabolism in diverse environments
ppi01200
Carbon metabolism
ppi01210
2-Oxocarboxylic acid metabolism
ppi01240
Biosynthesis of cofactors
Module
ppi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
ppi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ppi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
YSA_07988
00020 Citrate cycle (TCA cycle)
YSA_07988
00620 Pyruvate metabolism
YSA_07988
00630 Glyoxylate and dicarboxylate metabolism
YSA_07988
00640 Propanoate metabolism
YSA_07988
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YSA_07988
00280 Valine, leucine and isoleucine degradation
YSA_07988
00310 Lysine degradation
YSA_07988
00380 Tryptophan metabolism
YSA_07988
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
YSA_07988
00670 One carbon pool by folate
YSA_07988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppi04147
]
YSA_07988
Enzymes [BR:
ppi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
YSA_07988
Exosome [BR:
ppi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
YSA_07988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_oxidored
NAD_binding_8
FAD_binding_3
DAO
FAD_binding_2
AlaDh_PNT_C
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AFK71095
UniProt:
I3V024
LinkDB
All DBs
Position
complement(4311368..4312747)
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AA seq
459 aa
AA seq
DB search
MQQIIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAE
QFHQASRFTEPSPLGISVASPRLDIGQSVTWKDGIVDRLTTGVAALLKKHGVKVVHGWAK
VLDGKQVEVDGQRIQCEHLLLATGSTSVELPMLPLGGPVISSTEALAPKALPQHLVVVGG
GYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYE
NGCLLASDGKGGQLRLEADQVLVAVGRRPRTKGFNLECLDLKMNGTAIAIDERCHTSMHN
VWAIGDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQA
SQQGLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLIVGWQAVGVAVSELSTAFAQ
SLEMGACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagattatccagactaccctgttgatcatcggcggcggccctggcggctatgta
gcagccatccgcgccgggcaactgggcattcctaccgtactggtggaaggccaggcactg
ggcggcacctgcctgaacatcggctgcatcccgtccaaggcgctgatccacgtggccgag
cagtttcaccaagcctcgcgctttaccgaaccctcgccgctgggcatcagcgtggcttcg
ccgcgcctggacatcggccagagcgtcacctggaaggacggcattgtcgaccgtctgacc
accggtgttgccgccttgctgaaaaagcacggggtgaaagtggtgcatggctgggccaag
gtactggacggcaagcaggtcgaggtcgatggccagcgtatccagtgcgagcatctgttg
ctggcgaccggttccaccagtgtcgaactgccgatgctgccgctgggtggcccggtgatt
tcctcgaccgaagccctggcgccgaaagccctgccgcaacacctggtggtggtcggcggt
ggctatatcggcctggagctgggcattgcctatcgcaagctgggtgcacaggtgagtgtg
gtggaagcgcgcgaacgcatcctgccgacctacgacagcgaattgaccgccccggtggcc
gagtcgctgaagaaactgggcatcgcgttgcacctgggccacagcgtcgagggctacgaa
aatggctgcctgctggccagcgacggcaagggtgggcaactgcgtcttgaagccgatcag
gtactggtggccgtgggccgccggccacgcaccaagggcttcaacctggaatgcctggac
ctgaagatgaacggcaccgccattgccatcgacgagcgctgtcataccagcatgcacaac
gtctgggccattggcgacgtcgctggcgaaccgatgctggcgcaccgggccatggcccaa
ggcgagatggtcgccgaaatcatcgccggcaaggcccgacgcttcgagccggcagcgatt
gccgccgtgtgctttaccgacccggaagtggtggtggtcggcaagaccccggaacaagcc
agccagcagggcctggactgcatcgtcgcgcagttcccgtttgccgccaatggccgggcc
atgagcctggagtcgaaaagcggtttcgtgcgggtggtggcgcgccgtgacaaccacctg
atcgtgggttggcaggcggttggcgtggcggtctccgagctgtccaccgcgtttgcccaa
tcgctggagatgggcgcgtgcctggaagatgtggccggcaccattcatgcccaccccacg
ttgggtgaagcggtgcaagaagccgccctgcgcgcgttgggccacgccttgcatatctga
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