KEGG   Pseudomonas putida ND6: YSA_07988
Entry
YSA_07988         CDS       T02170                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi00010  Glycolysis / Gluconeogenesis
ppi00020  Citrate cycle (TCA cycle)
ppi00260  Glycine, serine and threonine metabolism
ppi00280  Valine, leucine and isoleucine degradation
ppi00310  Lysine degradation
ppi00380  Tryptophan metabolism
ppi00620  Pyruvate metabolism
ppi00630  Glyoxylate and dicarboxylate metabolism
ppi00640  Propanoate metabolism
ppi00670  One carbon pool by folate
ppi00785  Lipoic acid metabolism
ppi01100  Metabolic pathways
ppi01110  Biosynthesis of secondary metabolites
ppi01120  Microbial metabolism in diverse environments
ppi01200  Carbon metabolism
ppi01210  2-Oxocarboxylic acid metabolism
ppi01240  Biosynthesis of cofactors
Module
ppi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppi_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
ppi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ppi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    YSA_07988
   00020 Citrate cycle (TCA cycle)
    YSA_07988
   00620 Pyruvate metabolism
    YSA_07988
   00630 Glyoxylate and dicarboxylate metabolism
    YSA_07988
   00640 Propanoate metabolism
    YSA_07988
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    YSA_07988
   00280 Valine, leucine and isoleucine degradation
    YSA_07988
   00310 Lysine degradation
    YSA_07988
   00380 Tryptophan metabolism
    YSA_07988
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    YSA_07988
   00670 One carbon pool by folate
    YSA_07988
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppi04147]
    YSA_07988
Enzymes [BR:ppi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     YSA_07988
Exosome [BR:ppi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   YSA_07988
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA HI0933_like FAD_oxidored NAD_binding_8 FAD_binding_3 DAO FAD_binding_2 AlaDh_PNT_C UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: AFK71095
UniProt: I3V024
LinkDB
Position
complement(4311368..4312747)
AA seq 459 aa
MQQIIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQALGGTCLNIGCIPSKALIHVAE
QFHQASRFTEPSPLGISVASPRLDIGQSVTWKDGIVDRLTTGVAALLKKHGVKVVHGWAK
VLDGKQVEVDGQRIQCEHLLLATGSTSVELPMLPLGGPVISSTEALAPKALPQHLVVVGG
GYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYE
NGCLLASDGKGGQLRLEADQVLVAVGRRPRTKGFNLECLDLKMNGTAIAIDERCHTSMHN
VWAIGDVAGEPMLAHRAMAQGEMVAEIIAGKARRFEPAAIAAVCFTDPEVVVVGKTPEQA
SQQGLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLIVGWQAVGVAVSELSTAFAQ
SLEMGACLEDVAGTIHAHPTLGEAVQEAALRALGHALHI
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcaacagattatccagactaccctgttgatcatcggcggcggccctggcggctatgta
gcagccatccgcgccgggcaactgggcattcctaccgtactggtggaaggccaggcactg
ggcggcacctgcctgaacatcggctgcatcccgtccaaggcgctgatccacgtggccgag
cagtttcaccaagcctcgcgctttaccgaaccctcgccgctgggcatcagcgtggcttcg
ccgcgcctggacatcggccagagcgtcacctggaaggacggcattgtcgaccgtctgacc
accggtgttgccgccttgctgaaaaagcacggggtgaaagtggtgcatggctgggccaag
gtactggacggcaagcaggtcgaggtcgatggccagcgtatccagtgcgagcatctgttg
ctggcgaccggttccaccagtgtcgaactgccgatgctgccgctgggtggcccggtgatt
tcctcgaccgaagccctggcgccgaaagccctgccgcaacacctggtggtggtcggcggt
ggctatatcggcctggagctgggcattgcctatcgcaagctgggtgcacaggtgagtgtg
gtggaagcgcgcgaacgcatcctgccgacctacgacagcgaattgaccgccccggtggcc
gagtcgctgaagaaactgggcatcgcgttgcacctgggccacagcgtcgagggctacgaa
aatggctgcctgctggccagcgacggcaagggtgggcaactgcgtcttgaagccgatcag
gtactggtggccgtgggccgccggccacgcaccaagggcttcaacctggaatgcctggac
ctgaagatgaacggcaccgccattgccatcgacgagcgctgtcataccagcatgcacaac
gtctgggccattggcgacgtcgctggcgaaccgatgctggcgcaccgggccatggcccaa
ggcgagatggtcgccgaaatcatcgccggcaaggcccgacgcttcgagccggcagcgatt
gccgccgtgtgctttaccgacccggaagtggtggtggtcggcaagaccccggaacaagcc
agccagcagggcctggactgcatcgtcgcgcagttcccgtttgccgccaatggccgggcc
atgagcctggagtcgaaaagcggtttcgtgcgggtggtggcgcgccgtgacaaccacctg
atcgtgggttggcaggcggttggcgtggcggtctccgagctgtccaccgcgtttgcccaa
tcgctggagatgggcgcgtgcctggaagatgtggccggcaccattcatgcccaccccacg
ttgggtgaagcggtgcaagaagccgccctgcgcgcgttgggccacgccttgcatatctga

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