Pseudomonas putida ND6: YSA_08084
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Entry
YSA_08084 CDS
T02170
Name
(GenBank) Fis family two component sigma-54 specific transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi02020
Two-component system
ppi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YSA_08084
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
YSA_08084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppi02022
]
YSA_08084
02035 Bacterial motility proteins [BR:
ppi02035
]
YSA_08084
Two-component system [BR:
ppi02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
YSA_08084
Bacterial motility proteins [BR:
ppi02035
]
Flagellar system
Flagellar assembly proteins
Others
YSA_08084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
FleQ
AAA
HTH_20
HTH_30
MerR
AAA_3
AAA_19
AAA_2
Mg_chelatase
HTH_24
HTH_28
DUF2249
HTH_23
HTH_11
nSTAND3
PDE8A_N
Sigma70_r4_2
AAA_22
HTH_1
ATPase
AAA_14
HTH_17
AAA_7
HTH_Mga
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
AFK71140
UniProt:
I3V069
LinkDB
All DBs
Position
4364681..4366036
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AA seq
451 aa
AA seq
DB search
MAIKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLDDAFSLVVSDVNMPGMD
GHQLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAVDYLVKPFEPKALLSLVERHAAG
RVTGEEGPVACEPASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSPRAAQPF
VAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKL
LRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLR
ERPGDILQLAERLLARHVAKMKHTPVRLSPAARACLQAYAWPGNVRELDNALQRALILQQ
GGVIEAADFCLAGAIPLSAGTEPSLDVVADAGGLGDDMRRHEYQMIIDTLRAERGRRKEA
AERLGISPRTLRYKLAQMRDAGFDVEASLFG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaaggtgctgctggtcgaggatgaccgcgtattgcgccaggcgctgggcgat
accctggaaatcggcggtttcgcctaccaggccgtgggcagtgccgaagaagcgctggag
gccgtactggatgacgcgttcagcctggtggtcagtgacgtcaacatgcccggtatggac
gggcaccagttgctcagccagctgcgccgccagcagccacagttgccggtactgttgatg
acggcgcacgctgccgtcgagcgtgcggtcgaggccatgcgccaaggcgccgtcgactac
ctggtcaaaccgttcgagcccaaggcgctgctcagcctcgtggagcggcatgccgccggg
cgtgtgaccggcgaagaggggccggtggcctgcgagccggccagccgccaattgctggaa
ctggcggcccgtgtggcgcgcagtgactcgaccgtgctgatttccggcgagtccggtact
ggcaaggaagtgctggcgcgctacattcaccagcagtcgccgcgtgcggcgcagcccttc
gtggcgatcaactgcgcggcgatccccgataacatgctcgaggccaccctgttcggccac
gagaagggtgccttcaccggcgctattgcggctcaggcgggcaagttcgagcaggccgaa
ggcggcaccctgctgctcgacgaaatctcggaaatgcccatggccttgcaggccaagctg
ctgcgtgtgctgcaggagcgcgaggtggagcgggtaggcgggcgcaagccgatcagcctg
gacattcgggtgctggccaccaccaaccgcgacctggccggcgaagtggcagccgggcgc
ttccgcgaagacctgtactaccgcctgtcagtgtttccgctggcctggcgcccgctgcgt
gagcggccgggcgatatcctgcagctggctgagcgcttgctggcgcgccatgtggccaag
atgaagcacaccccggtgcgcctctcgccagcggctcgggcctgcctgcaagcctatgcc
tggccgggcaacgtgcgcgaactggacaacgccctgcagcgggcgttgattctgcagcag
ggtggcgtgatcgaggcggcggatttttgtctggcaggcgccattccattgtcagctggc
accgagccatctctcgacgtggttgctgatgccggcgggctgggggatgacatgcgtcgt
cacgagtaccagatgatcatcgacaccctgcgcgccgagcgcggccgccgcaaagaggcg
gccgaacgcctggggatcagtccacgtacgttgcgctacaagctggcgcagatgcgcgat
gccgggtttgacgtcgaggccagcctgttcggctga
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