Pseudomonas putida ND6: YSA_08388
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Entry
YSA_08388 CDS
T02170
Name
(GenBank) two component transcriptional regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi02020
Two-component system
ppi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YSA_08388
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YSA_08388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppi02022
]
YSA_08388
Two-component system [BR:
ppi02022
]
OmpR family
QseC-QseB (quorum sensing)
YSA_08388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
AFK71306
UniProt:
I3V0N5
LinkDB
All DBs
Position
4526389..4527072
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AA seq
227 aa
AA seq
DB search
MHVLLCEDDDLIAAGICAGLTAQGLTVDRVGNAAAARAMLQAAQFDVMILDLGLPDEDGL
KLLRRLREKGETLPVLVLTARDAVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVA
GRAVNVIEHGPLRYDPSSCEATLAGQHVDLSRREQALLQALLQNPGRVLSSEQLKDCVYG
FSDEVESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPAQAPQEAAS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcacgttctgctctgcgaggacgacgacctgatcgccgccggcatctgcgccggcctc
accgctcagggcctgaccgtggaccgggttggcaacgccgccgctgcgcgagcgatgctg
caggccgcgcagttcgacgtgatgatcctcgacctcggcctgcccgacgaagatggcctc
aagctgctgcgccgcctgcgcgaaaaaggcgagaccctgccggtactggtgctcaccgcc
cgcgatgccgtcactgatcgtgtcgatggcctgcaggccggtgccgacgattacctgctc
aagcccttcgatctgcgcgagctggccgcacgcctgcataccttgctgcggcgggtggcc
gggcgggcggtgaacgtgatcgagcacggcccgctgcgctatgacccgagtagctgcgag
gcgaccttggccggccagcatgtcgacctgtcccgccgtgagcaggccctgctccaggcg
ctgctgcagaaccccgggcgcgtgctgtccagcgagcaactgaaggactgcgtatatggt
ttcagcgacgaggtcgagagcaacgccctgaatgtgcacatccaccacctgcgtcgcaag
ctgggtaacggcattgtcgagaccgtgcgtggcctgggctaccggctgggcccggcgcag
gcaccgcaagaggccgcatcatga
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