KEGG   Pseudomonas putida ND6: YSA_08443
Entry
YSA_08443         CDS       T02170                                 
Name
(GenBank) Dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi00010  Glycolysis / Gluconeogenesis
ppi00020  Citrate cycle (TCA cycle)
ppi00260  Glycine, serine and threonine metabolism
ppi00280  Valine, leucine and isoleucine degradation
ppi00310  Lysine degradation
ppi00380  Tryptophan metabolism
ppi00620  Pyruvate metabolism
ppi00630  Glyoxylate and dicarboxylate metabolism
ppi00640  Propanoate metabolism
ppi00670  One carbon pool by folate
ppi00785  Lipoic acid metabolism
ppi01100  Metabolic pathways
ppi01110  Biosynthesis of secondary metabolites
ppi01120  Microbial metabolism in diverse environments
ppi01200  Carbon metabolism
ppi01210  2-Oxocarboxylic acid metabolism
ppi01240  Biosynthesis of cofactors
Module
ppi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppi_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
ppi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ppi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    YSA_08443
   00020 Citrate cycle (TCA cycle)
    YSA_08443
   00620 Pyruvate metabolism
    YSA_08443
   00630 Glyoxylate and dicarboxylate metabolism
    YSA_08443
   00640 Propanoate metabolism
    YSA_08443
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    YSA_08443
   00280 Valine, leucine and isoleucine degradation
    YSA_08443
   00310 Lysine degradation
    YSA_08443
   00380 Tryptophan metabolism
    YSA_08443
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    YSA_08443
   00670 One carbon pool by folate
    YSA_08443
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppi04147]
    YSA_08443
Enzymes [BR:ppi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     YSA_08443
Exosome [BR:ppi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   YSA_08443
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like GIDA NAD_binding_8 FAD_binding_3 3HCDH_N Thi4 DAO AlaDh_PNT_C Lys_Orn_oxgnase 2-Hacid_dh_C Amino_oxidase DUF3373
Other DBs
NCBI-ProteinID: AFK71338
UniProt: I3V0R7
LinkDB
Position
4557877..4559313
AA seq 478 aa
MTQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQG
HGKLLAGKKVEVTKADGTTEIIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAV
PKRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIK
LGARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLAADSGVTIDERGY
IFVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgacccagaaattcgacgtagtggtaatcggtgcaggcccaggcggctatgtggctgcc
atcaaggccgcacaacttggtctgaagactgcctgtatcgagaagtacaccgacgccgag
ggcaagctggccctgggcggcacctgcctgaacgtaggttgcattccatccaaggcgctg
ctggacagctcctggaaatacaaggaagccaaagagagcttcaacgtccacggtatctcc
actggcgaagtgaagatggacgtggccgcgatggttggccgcaaggcgggcatcgtcaag
aacctgaccggtggcgttgccaccctgttcaaggccaacggcgtcacttcgatccagggc
cacggcaagctgctggccggcaagaaagtcgaagttaccaaagctgacggcaccactgaa
atcatcgaagccgagaacgtgatcctggcttccggctcgcgcccgatcgacattccgccg
gccccggtcgaccagaacgtcatcgtcgactccaccggcgccctggaattccaggccgta
ccgaagcgcctgggcgttatcggtgcaggcgtgatcggcctggagctgggctcggtatgg
gctcgcctgggtgctgaagtgaccgtcctggaagccctggacaccttcctgatggctgcc
gacaccgccgtgtcgaaagaagcccagaagaccctgaccaagcaaggcctggacatcaag
ctgggcgctcgcgtcaccggctcgaaagtcaacggcaatgaagtcgaagtgacctacacc
aacgccgaaggcgagcagaagatcaccttcgacaagctgattgttgccgtcggccgtcgc
ccggtgactaccgatctgctggctgccgacagcggcgtgaccatcgacgagcgtggctac
atcttcgtcgacgattactgcgccaccagcgttccgggcgtgtacgccatcggtgacgtg
gtacgcggcatgatgctggcccacaaggcttcggaagagggcatcatggtcgttgagcgc
atcaagggccacaaggcccagatgaactacgacctgatcccatcggtcatctacacccac
ccggaaatcgcgtgggtcggcaagaccgaacaggccttgaaggccgagggcgttgaggtt
aacgtgggcaccttcccgttcgcggccagcggccgtgcgatggctgccaacgacaccggt
ggtttcgtcaaggtcatcgccgatgccaagaccgaccgcgttctgggtgttcacgtgatt
ggcccatcggctgccgaactggtgcagcagggcgcaatcgcaatggaattcggcaccagt
gccgaggatctgggcatgatggtcttcagccatccaaccctgtccgaagcgttgcatgaa
gcagcgctggcggtgaatggcggcgccattcacgtggccaaccgtaagaagcgttaa

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