Pseudomonas putida ND6: YSA_08512
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Entry
YSA_08512 CDS
T02170
Name
(GenBank) TonB-dependent receptor, plug
KO
K02014
iron complex outermembrane recepter protein
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppi02000
]
YSA_08512
Transporters [BR:
ppi02000
]
Other transporters
Pores ion channels [TC:
1
]
YSA_08512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF481
Motif
Other DBs
NCBI-ProteinID:
AFK71369
UniProt:
I3V0U8
LinkDB
All DBs
Position
complement(4625755..4627869)
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AA seq
704 aa
AA seq
DB search
MFPGTPPYPRLLLLTALLGGQAAADDLFIDTPDLPQVLTATRLKQSPAAVPGSMTVLDSE
LIRASGARDIPELLRLVPGMMIGYGAGNQPTVNYHGSNVNDARRMQVLIDGRSVYRAGLA
TVDWSDIPLAMEDIERIEVFRGPNTVSYGANALMAVVNILTRNPADSHGTRLKVTRGQDG
INDFYASHGFGWDGGDMRLSLSGQQDDGFDENQFGQDYRDSRRLTRFNLSANHNLAVDQT
LEWQLAAKEGSNQRPYTYQPVFQQYESGNNADVNAKDYAGSLRWTKDFSAEHSLYIQGSA
QHFDRQQVWRACDALQSFSPELTQLWQMNPDFAEKVARGIATGAPLSTDDPALKGLLQKV
QQQWEQGGREQVCGDVDQSTRETRYDLEIQDTLSLTDSLRLLSGMNYRYDRADSQTYFNG
SIDDQTWRLFGQLEWRADEHWILQGGAMFEDSRLSGSSLTPRVAVNYLITPRHGLRAVYS
EAVRSPDMFENNVNWSYTVKNLTPNSFGLQNGEYFVKTRGPGDLEQERMRSRELGYNGYF
SDIDLSLDVKLFYDEITGMISEPLRNNQYIASNANKARFSGSEAQMDWRPTLRDRLRLTY
AYVDAWASNPDDRRLSARNSGSAGWMREWGAGWSSALFYYGDDALNQYRYERLDLRLAKR
FRVYGSNLELAALWQQRLDDEPTSALQNRYDSRHRLSVSAELEF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgttccctggcacgccaccgtacccgcgcctgctgttattgaccgccctgctcggcggc
caggctgcggccgacgacctgttcatcgacacccccgacctgccacaggttctgaccgcc
acacgcctgaaacaatcccccgccgctgtcccgggcagcatgaccgtactcgacagcgaa
ctgattcgcgccagcggtgcccgtgacatccccgaactgctgcgcctggtaccgggcatg
atgatcggctacggtgccggcaatcaacccacggtcaactaccacggcagcaacgtcaac
gacgcacggcgcatgcaggtactgatcgatggccgttcggtgtaccgcgcaggcctggcc
acggtggactggagcgacatccccttggccatggaggacatcgagcgcatcgaggtgttc
cgcggcccgaacaccgtcagctatggcgccaacgcgctgatggcagtggtcaacatcctc
acccgcaaccccgccgacagccatggtacacggctgaaagtgacgcgcggccaggacggc
atcaacgacttctatgccagccacggcttcggctgggacggtggcgacatgcgcctgtcg
ctgtcgggccaacaggacgacggcttcgatgagaaccagtttggccaggactaccgcgac
agccgccgactgacccgcttcaacctcagcgccaaccacaacctggcggtcgaccagacc
ctggagtggcaactggcggccaaggaaggcagcaatcagcggccctacacctaccagccg
gtgttccagcagtacgagtccgggaacaatgccgacgtcaacgccaaggactatgcgggc
tcgttgcgctggaccaaagacttcagcgctgaacacagcctttatatccagggctcagcc
cagcattttgatcgccagcaagtgtggcgcgcctgtgatgccttgcagtcgttcagcccc
gaactgacccagctctggcagatgaaccccgacttcgccgaaaaagtagcgcgcggtatt
gcgaccggcgcccccctttccactgacgacccagccctgaaaggccttctgcagaaagtg
cagcagcaatgggagcagggagggcgggagcaggtctgcggcgatgtggaccagagcacc
cgtgaaacccgctatgacctggaaatccaggacaccctgagcctgactgatagcctgcgt
ctgctcagtggcatgaactaccgctatgatcgcgccgactcgcagacctacttcaacggc
agcatcgacgaccagacctggcgcctgttcggccagctggaatggcgggccgacgagcac
tggatattgcagggtggggccatgttcgaagactcgcgcctgtcaggcagttcgctgacc
ccacgcgtcgcggtcaactacctgatcaccccacgccacggcctgcgtgcggtgtactcc
gaagcggtgcgctcgcccgacatgttcgagaacaacgtcaactggagttacacggtcaag
aacctcacccccaattcattcggcctgcaaaacggtgagtacttcgtcaagacccgtggc
cctggcgaccttgaacaggagcgcatgcgctcgcgcgagctgggctacaacggctacttc
agcgacatcgacctgagcctggatgtgaagctgttctacgacgagatcaccggcatgatc
agcgagccgctgaggaacaaccagtacatcgccagcaacgccaacaaggcccgtttcagc
ggcagcgaggcgcaaatggactggcgccccaccctgcgcgaccgcctgcgcctgacctat
gcttacgtcgatgcctgggccagtaaccccgacgaccgtcgccttagcgcccgcaacagc
ggctcggccgggtggatgcgcgaatggggtgccggctggtcgagcgcgctgttctattac
ggtgacgatgccctcaaccagtaccgctacgagcgtctggacctgcgcctggccaagcgt
tttcgggtgtatggcagcaacctggagctggcggcgctgtggcagcagcgcctggacgat
gaaccgacctcggccctgcagaaccgctacgacagccgtcaccgcctgagcgtgagcgcg
gagctggagttctga
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