Pseudomonas putida ND6: YSA_08566
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Entry
YSA_08566 CDS
T02170
Name
(GenBank) DnaQ
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi03030
DNA replication
ppi03430
Mismatch repair
ppi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YSA_08566
03430 Mismatch repair
YSA_08566
03440 Homologous recombination
YSA_08566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppi03032
]
YSA_08566
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_08566
Enzymes [BR:
ppi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YSA_08566
DNA replication proteins [BR:
ppi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YSA_08566
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YSA_08566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
T2SSG
Motif
Other DBs
NCBI-ProteinID:
AFK71397
UniProt:
I3V0X6
LinkDB
All DBs
Position
4660225..4660983
Genome browser
AA seq
252 aa
AA seq
DB search
MEQQQDKRFVILDTETTGMPVGEGHRIIEIGCVEVIGRRLTGRHFHVYLQPDRESDEGAI
NVHGITDAFLVGKPRFGDVAEEFFQFIQGATLVIHNAAFDVGFINNEFALLGQQDRADIS
QHCTILDTLLLARSRHPGQRNSLDALCKRYDIDNSGRELHGALLDSELLADVYLAMTGGQ
TSLSLAGNGADAEEDGQGAGGSEIRRIVGRAPGRVIMASAEELEAHAERLAAIAKSAGGP
SLWQALTETPAG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtggagcagcagcaagataaacggttcgtcattctcgataccgaaaccacgggtatgccg
gttggcgaaggccaccggatcatcgagatcggctgtgtcgaggtcatcggccggcgcctg
accgggcggcacttccacgtctacctgcagcccgaccgcgagagtgacgagggcgcgatc
aacgttcacggcatcacggatgccttcctggtcggcaagccccgctttggtgatgtcgcc
gaggagttcttccagttcatccagggcgccacgctggtcatccacaacgcggcgttcgac
gttggcttcatcaacaacgaattcgccttgctgggccagcaggaccgtgccgacatttcg
cagcattgcaccattctggacaccctgctgctggcacgttcgcgccacccggggcagcgc
aacagcctggatgcgctgtgcaaacgctacgacatcgacaactcgggccgtgagttgcac
ggcgcactgctcgactcggaactgctggccgacgtttacctggcaatgaccggtggccag
accagcctgtcgttggctgggaatggcgcagatgccgaagaggacgggcagggcgctggc
ggcagcgagatccgccggattgtcgggcgtgcgccagggcgggtgatcatggccagcgct
gaagagctggaggcgcatgccgagcggctggcggccattgccaagtcggcgggtgggcct
tcgctgtggcaggccctgactgagacgccagccggctga
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