Pseudomonas putida ND6: YSA_09177
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Entry
YSA_09177 CDS
T02170
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00270
Cysteine and methionine metabolism
ppi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
YSA_09177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppi03000
]
YSA_09177
03032 DNA replication proteins [BR:
ppi03032
]
YSA_09177
03036 Chromosome and associated proteins [BR:
ppi03036
]
YSA_09177
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ppi02048
]
YSA_09177
Enzymes [BR:
ppi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
YSA_09177
Transcription factors [BR:
ppi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
YSA_09177
DNA replication proteins [BR:
ppi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
YSA_09177
Chromosome and associated proteins [BR:
ppi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
YSA_09177
Prokaryotic defense system [BR:
ppi02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
YSA_09177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AFK71737
UniProt:
I3V1W6
LinkDB
All DBs
Position
complement(4948578..4950521)
Genome browser
AA seq
647 aa
AA seq
DB search
MSAFQKKNPLDFKTQYGLGFDPQDDEIVVDFFCGGGGAGTGLEMGLGRPVTVAKNHSPAA
ISMHTANHPAARHFTTDVFEGDPDEECQGRPVGWFHMSPDCTHHSQAAGGQPRKREIRNL
SWIGLKWAGKKKPRVISLENVKQILQWGPLMAKRDKNTGRVMKLDGTVAAVGERVPVQQQ
FLVPDPKRRGITWRRFVHLLEGMGYQMEWRIIKACDFGAPTSRERLFMIARCDGQPIVWP
EPTHAKHPTKGQHKWRTAADCIDWSVPSKSIFGRKKELAAATLRRVAKGMKKFVLDNPQP
FIVPIANWSGELAQSAHEPLRTVTSWPRGGSFAMASPVILPATHQGADRVNDPGDPLPTV
TATNRGELMMASPVMVGPGGPVYAGKPVAADQPMGTLMTQSHRALASAHLVKFRFNSEGA
AITDPVPTITSGGNYKRPAGAAHAMGVCTAFIEQANGGFNTTPAKGADEPLTTVTNTGSQ
QRLVTASLATLRRNCVGRPVDDLVPTMTAGAEHHALVEYKLSPEHEEGALRVAAFLISYY
GTENISACDAPAPTVTTKDRLGLVTVFVKGTPYVIVDICLRMLQPHELYRAQGFPASYII
DKGADGKPFTKTEQVHMCGNSVSPPPMAAIARANDPWIRSNHKAAAA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcattccagaaaaagaacccgctcgacttcaaaacccagtacggccttggcttc
gatccgcaagacgatgagatcgtggtggacttcttctgcggtggcggcggcgccggtacc
gggctggagatgggcctgggccggccggtgacggtggcaaagaaccacagcccggcggcc
atcagcatgcacaccgccaaccaccctgcagcgcgccacttcaccaccgacgttttcgag
ggtgacccggatgaggaatgccaggggcggccggttggctggttccacatgagccctgac
tgcacccaccacagccaggctgccggcggccaaccgcgcaagcgcgagatccgcaacctc
tcgtggatcggcctcaagtgggccggcaagaagaagcctcgggtgatcagcctagagaac
gttaagcagatccttcagtggggtccgctgatggccaagcgcgacaagaacaccgggcgg
gtgatgaagctggacggcacggtcgctgctgtcggagagcgtgtgccggtgcaacagcag
ttcctcgtgccagacccgaagcgccgcggcatcacctggcgccgcttcgtgcacctgctc
gaaggcatgggctaccagatggagtggcggatcatcaaggcatgcgacttcggcgctccc
accagccgggagcggctgttcatgatcgctcgctgcgacgggcaacccatcgtgtggcca
gagccgacccacgccaaacatccaaccaagggccagcacaagtggcgcaccgccgccgac
tgcattgactggagcgtgccgagcaagagcatctttggtcgcaagaaggagctggcagcc
gcaacgctgcgacgcgtggccaagggcatgaagaagttcgtgctggacaacccgcagcct
ttcatcgtgccgatagccaactggtcgggcgaactggcccagtcggcgcatgagccactt
cgcacggtgacctcctggccgcgcggcgggtcgtttgccatggcaagcccggtgattctt
ccagcaacacaccagggcgccgaccgagtgaacgatccgggcgatccactaccaacagtt
actgcgaccaaccgtggcgagctgatgatggccagccccgtgatggtcgggcccggtggc
ccggtgtatgccggtaagccagtagccgctgaccagcccatgggaacgctgatgacccaa
agccaccgggcgctggcatcggcgcacctggtcaaattcaggttcaacagtgaaggtgca
gccatcaccgatccggtgccgaccatcacgagcggcggcaactacaagaggcccgcgggt
gcggcccatgccatgggcgtgtgcacagccttcatcgagcaggccaacggcggattcaac
accacgccagccaagggcgcggacgagccactgaccacagtcaccaacaccggcagccag
cagcgcctcgtgaccgccagcctagccacgctccggcgcaactgcgtaggccgtcccgta
gatgacctggtgccgacaatgaccgcaggcgcagagcatcacgccctggtcgagtacaag
ctgtcgccagagcacgaggaaggcgccctgcgcgtcgcggcattcctgatcagctactac
ggcacagagaacatcagcgcctgcgacgccccagcgccgacggttaccaccaaggaccgc
ctaggcctggtcaccgtcttcgtgaagggcaccccgtacgtcatcgtcgacatctgcctg
cgcatgctgcagccgcacgagctctaccgggcccaaggcttcccagccagctacatcatc
gacaagggagccgacggcaagccgttcaccaagaccgagcaggtgcacatgtgcggcaac
agcgtcagcccgcccccgatggccgccatcgcccgcgctaacgatccttggatacgttca
aatcacaaagccgctgccgcctga
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