Pseudomonas putida ND6: YSA_09244
Help
Entry
YSA_09244 CDS
T02170
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppi03032
]
YSA_09244
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_09244
Enzymes [BR:
ppi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
YSA_09244
DNA replication proteins [BR:
ppi03032
]
Prokaryotic type
DNA Topoisomerases
YSA_09244
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YSA_09244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
AFK71770
UniProt:
I3V1Z9
LinkDB
All DBs
Position
complement(4969340..4970362)
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCPLPRTLHYVDDSQPGLTRRRWRDRFIYLDADGQRVRDSETLARIAALVIPPAYTDV
WICADPQGHLQATGRDARGRKQYRYHAQWRELRDQHKYGRMLAFAQALPKLRTQLEAHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNRSYGLTTLRNRHVQIKGSSIRFQFRGK
RGVEHNVTLNDRRLANLLKRCMELPGQALFQYLDEDGQRHSVGSTEVNQFLQQLTGADFT
AKDYRTWAGSSLALNLLKPLAWEPESEAKRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL
EHYTLGRLANLPKNRVRKGLDPEEVALLLFLQALEEQEAH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactgccccctgccgcgcaccctgcactacgttgacgacagtcagccgggcctg
acccgtcggcgctggcgcgaccgtttcatctacctcgatgccgatggccaacgagtacgc
gacagcgaaaccctcgcacgcatcgccgcactggtgatccccccggcctacacggatgtg
tggatctgcgccgacccgcaaggccacctgcaagccaccggccgtgatgcccgtggccgc
aagcagtaccgctaccatgcgcagtggcgcgaactgcgcgaccagcacaaatacgggcgc
atgcttgcgttcgcccaagccctgccaaagctgcgcacacagctggaagcccacttggcg
cggccagggctggaccgggaaaaggtcatggcgctggtggtgagcctgctggaccacacc
ctgatccgcattggcaaccagcgctacctgcgcgataaccggtcgtacggattgaccacc
ctgcgcaatcgccatgtacagatcaaaggcagcagcattcgctttcaattccgcggcaag
cgcggcgtcgaacacaacgtcaccctcaacgaccggcgcttggccaacctgctcaaacgc
tgcatggaactgcctgggcaggcactgtttcagtacctggatgaagacggccagcgccat
agtgtcggctccaccgaggtcaatcagtttttgcagcagttgaccggcgccgacttcact
gccaaggactatcgcacctgggccggcagcagcctggcattgaacctgctgaagcccttg
gcctgggagccggagagtgaagccaaacgtcaggtcgccgcaatagtccgccaggtggcc
acgcgcctgggcaatacgccggccgtgtgccgacgctgctatatccacccggcagtcctg
gagcactataccttggggcgccttgccaatttaccgaaaaaccgagtgcgcaaaggcctg
gacccggaggaagtggccttgctgttgtttcttcaggcactcgaggaacaggaggcccat
tga
DBGET
integrated database retrieval system
