Pseudomonas putida ND6: YSA_09280
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Entry
YSA_09280 CDS
T02170
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YSA_09280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppi02000
]
YSA_09280
Transporters [BR:
ppi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
YSA_09280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AFK71786
UniProt:
I3V215
LinkDB
All DBs
Position
complement(4983829..4984854)
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AA seq
341 aa
AA seq
DB search
MLLSKRVTAVLSASLLTLACQAAQAADSLNFVSWGGTTQDAQKEAWAVPFTKATNIKVVQ
DGPTDYGKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPLDFNQIKRDKIDPRFVSDH
GVGSFFFSFVLGYNEGKLGANKPVDWTALFDTKAYPGKRALYKWPSPGVLELALLADGVA
PDKLYPLDLDRAFKKLDTIKKDIVWWGGGAQSQQLLASGEASLGQFWNGRVYALQQDGAP
VGVSWKQNLVMADFLVIPKGAKNKEAAMKFLANASSAEGQAEFANKTAYAPVNVDSVAKL
DKDLAPNLPTAYAQDQVTLDFAYWAKNGQAIAARWNEWLVK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctgttaagcaaacgtgtaaccgcagtgctgtccgccagcctgctgaccctggcatgt
caggccgcccaggccgccgacagcctcaacttcgtcagctggggcggtacgacccaggac
gcccagaaagaagcgtgggcagtaccgttcaccaaagccacgaacatcaaggtcgtgcag
gacggtcccaccgactacggcaagctcaaggccatggtcgagagcggtaacgtgcagtgg
gacgtggtcgacgtcgaagccgactttgccctgcgtgccgccagcgaaggcctgctcgaa
cccctggacttcaaccagatcaagcgcgacaagatcgacccacgcttcgtctctgatcat
ggcgtcggctcattcttcttctccttcgtgctcggctacaacgaaggcaagctcggggcc
aacaagccggtggactggaccgcgctgttcgacaccaaggcctaccccggcaagcgagcc
ctgtacaaatggcccagccccggcgtgctggaactggccctgctggccgacggcgtagcc
cctgacaagctgtacccgctggacctggaccgcgccttcaagaagctcgacaccatcaag
aaagacatcgtctggtggggcggtggcgcccagtcacagcagttgctggcctcgggtgaa
gcctcgctcggccagttctggaatggccgtgtctacgccctgcagcaagacggtgcaccg
gtgggtgtgagctggaagcagaacctggtcatggccgacttcctggtcatccccaaaggc
gccaagaacaaggaagcggccatgaaattcctggccaacgccagcagcgccgaaggccag
gccgaattcgccaacaaaaccgcctatgcgccggtcaacgtcgacagcgtggccaagctg
gacaaggacctcgcgccaaacctgccaactgcctacgcccaggaccaggtcaccctcgac
ttcgcctactgggccaagaacggtcaagctatcgcggcccgctggaatgagtggttggtc
aaatga
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