Pseudomonas putida ND6: YSA_09398
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Entry
YSA_09398 CDS
T02170
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00550
Peptidoglycan biosynthesis
ppi01100
Metabolic pathways
ppi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YSA_09398
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YSA_09398
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppi01011
]
YSA_09398
Enzymes [BR:
ppi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YSA_09398
Peptidoglycan biosynthesis and degradation proteins [BR:
ppi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
YSA_09398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AFK71855
UniProt:
I3V284
LinkDB
All DBs
Position
complement(5039193..5041088)
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AA seq
631 aa
AA seq
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MPQPIPLKDHEKEKHLVNRRLLACAAMVFSLCAVLVGRLYVLQVLQHDQQTAVSENNRVH
VLPIAPERGLIYDRNGVVLADNKPSFDLTMTRERSGGDSAKVLDTLTQVLGLTEDDRKQF
DKDLRRGRKPFEPVTLMVGLSEEQIALVAVNQFRLPGLEVEPQFIREYPLAGHFAHSVGY
VGRINEKEAKTLDSTEYRGTQSIGKTGIERFYESQLHGHVGYEEVETNAQGRVMRVLNHK
DPTPGQDIVLTLDAHLQIAAEKALGDRRGSVVVLDPANGDVLAMVSNPSFDPNLFVKGIS
FKQYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVITPGSRVFDPGYYELPN
YDHKYRNWNRSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMF
EEASGLMPSAEWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGVWHRPH
LAMTVGGDTPIDPNPMPDIVLHDKHAWDQVSQGMQMVMHDPRGIARAAAAGAQYRIAGKS
GTAQVVAIKQGERYNRNKTLERHRDNALFVGFAPAEHPSVVVAVMIENGEAGGRVAGPVV
REVMDAYLLDEQGHLKPEYAGGAPTRGVPHT
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaacccatcccgctaaaggaccacgaaaaggaaaaacacctggtcaaccgtcgg
cttctggcctgcgctgccatggtgttcagcctgtgtgctgtcctggtgggccggctctat
gtgctgcaagtgctgcagcacgaccaacaaacggccgtgtcggaaaacaaccgcgtgcac
gtgctgcccatcgcccccgaacgcgggctgatctatgaccgcaacggcgtggtactggcc
gacaacaagcccagcttcgacctgaccatgacccgcgagcgatcaggcggcgactcggcc
aaggtgctcgacaccctgacgcaggtgctgggcctgaccgaagacgaccgtaagcagttc
gacaaggacctgcgccgtggccgcaaaccgttcgagcccgtgacccttatggtgggcttg
agcgaggagcagatcgccctggtagcggtgaaccagttccgcctgccgggcctggaggtg
gagccgcagttcatccgtgagtacccactggccgggcatttcgcgcattcagtgggctat
gtgggacgcatcaacgagaaagaagccaagacgctcgacagcacggagtaccgcggcacc
caatcgattggcaagaccggcatcgagcgcttttacgaaagccagctgcatggccacgtg
ggctacgaagaggtcgagaccaacgctcaggggcgggtgatgcgcgtgctcaaccacaag
gacccgacccctgggcaggatatagtcctcaccctggacgcccatttgcagatagccgca
gaaaaagcgctgggtgaccgccgtggctcggtggtggtattggacccggccaatggtgac
gtactggcgatggtcagcaatcccagcttcgaccccaacctgttcgtcaagggtatcagc
ttcaagcagtatgccgcgctgcgcgactccatcgaccgcccactgttcaaccgcgtcctg
cgcggcctgtatgcgcctggctcgaccgtgaagcctgaagtggccatcgctggcctcgac
agcggggtgatcacccctggcagccgggtgttcgacccgggctactacgaactgcccaac
tatgaccacaagtaccgcaactggaaccgcagcggcgacggctgggtggacatgtacacc
gccatcatgcgctccaacgacacctacttttacgacctggcgcacaagctgggcatcgac
cgcctgcacgactacatggccgagttcggcctgggccagaaggtgtcgctggacatgttc
gaggaagcctccgggctgatgccctcggccgagtggaagcgcgccacacgacgccaggcc
tggttcccgggcgagacgctgatccttggcattggccagggttacatgcaggtcaccccc
ctgcagctggcccaggccaccagcctgctggcaagcaagggcgtgtggcaccgtccgcac
ctggccatgaccgtgggtggcgatacgccgatcgacccaaaccccatgcccgacatcgtg
ctgcacgacaagcatgcctgggaccaggtcagccagggcatgcagatggtcatgcacgac
ccgcgcggcattgcccgcgccgcagcggcaggcgcgcagtatcggatcgccggcaagagt
ggtaccgcgcaggtggtggcgatcaagcagggtgagcgttacaaccgcaacaagaccctg
gagcgccaccgcgacaacgccctgtttgtcggctttgctccggctgagcaccccagtgtg
gtggtggcggtcatgatcgagaacggtgaggctggaggccgggtcgcagggccggtggtg
cgggaagtgatggatgcttatctgctggatgagcaagggcacctgaagccggagtatgcg
ggcggcgcacccactcggggtgtgccacacacatga
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