Pseudomonas putida ND6: YSA_10008
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Entry
YSA_10008 CDS
T02170
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
ppi
Pseudomonas putida ND6
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppi02000
]
YSA_10008
Transporters [BR:
ppi02000
]
Other transporters
Pores ion channels [TC:
1
]
YSA_10008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF3237
Motif
Other DBs
NCBI-ProteinID:
AFK72205
UniProt:
I3V384
LinkDB
All DBs
Position
5372871..5376545
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AA seq
1224 aa
AA seq
DB search
MKRVIKFTSLGLLGGVASMGLVLGLLLGTQAGSRWALGKVPGLEVADFQGRLAGSWQASR
LTWADGGSTVEMQAPSLAWSPACLLRATLCIDRLQADRIDMAFAPSTEPTESAPLQLPTL
RLPLAIELGEVKVGQLRLDGSDLLGDLQLAAHWTNSGIRIDSLRLLRDDLQLSLQGDLQP
EGDWPVTLQAQLQLPAVDEKPWQLALTANGQLQKTLELAGTSSGYLDATLSGQLQALAEH
LPATLHIRSEAFKPAGALPDTLQLNALELDAKGDLLDGYQLSGRASLPAEQSPIALLLSG
LVDSKGARLDALDLTASDSQRVKLQATADWQQGLSADAQLDWQDFPWLRLYPLETPPEVT
LKRFNTQVHYRDGNYQGTFTGDLDGPAGAFSLASPFEGDLTQVKLPQLALSAGQGKAAGS
VAVRFADTLAWDVDLQLSALDPAYWLAELPGTLAGPLRSKGELKGDTLTLDAQLDLKGRL
RGQPAMLKAEAQGAGQNWTLGTLAIQLGDNRINGSGSVQQRLAGQIDLDLPRLGQLWPRL
QGGVKGRLDVAGTLQAPQGTLTLQGQRLAQGENRLQQLDLDARLDNAQRGVVGLKATGIH
LGDTALGTLQANGKGDIRQQALTLALDGPQLKLDLGLDGQLNKGDWRGRLATGRIQAGGQ
DWQLQAPARLQRLASGQLDFGAHCWRSGQASLCGDDQRLAPEPRLRYHLKQFPLGSLAQW
LPKDFAWQGLLNADINLDIPASGPKGTVVVDASGGTLRVRDKGRWVDFPYQALRLDSTLA
PRRIDTRLAFRGERLGELNVNARLDPLGKNKPLSGDFRLAGLDLSVARPFVPMVERLAGQ
LNGSGRLSGTLLAPQVNGNLMLSGGEVSGAELPASLQDLSLQALIAGEQVQLNGNWRSGE
AGRGQLSGNLTWGQALGMDVRLQGQQLPVAVEPYATLEVAPDLTLRLIDDKLAVTGKVQV
PKGKITVRELPPSTVKVSDDTVIVGHQTEEGKPPMAMAMDIDVEVGRDKLSFSGFGLTAN
LLGHVHIGDNLDTRGELSLADGRYRAYGQRLTIRRARLLFAGPIDQPYLDIEAIRKVDDV
IAGIRLSGSAEQPTTKVFSEPAMSQEQALSYLVLGRPLGNTGEDNNMLAEAALGLGLAGS
AGITGSLASSLGIDDFQLDTEGSGNSTSVVASGNLTEKLSLRYGVGVFEPANTIALRYKL
SKKVYLEAASGLASSLDIFYKRDF
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgcgtaatcaaatttacttcactgggcctgctggggggcgtcgcgagcatgggc
ctggtgctcggcttgctgctgggtacccaggccggcagccgctgggcactgggcaaggtg
cccgggcttgaagtggccgacttccagggtcgcctggcgggcagttggcaggccagccgg
ctaacctgggccgacggcggcagcacggtagagatgcaggcgccgtcgctggcctggtcg
cctgcctgcttgctgcgcgcgaccttgtgcattgaccggttgcaggcagaccgcattgac
atggcctttgcgccaagcactgaacccaccgagagcgccccgctgcaattgccgaccctg
cgcttgccgctggccatcgaactgggcgaggtcaaggtcgggcagctgcgcctggatggc
agtgatctgcttggcgatttgcaactggctgcgcactggaccaatagcgggatacgcatc
gacagcctgcggctgctgcgcgacgacctgcaattgagcctacagggcgacctgcaaccc
gaaggcgactggccggtaacactacaggcgcaattgcagttgcctgcggtagacgaaaaa
ccctggcaactggcactgacggccaatggccaattgcagaagacgctggagctcgccggc
accagcagtggttacctcgatgccacattgagcgggcagttgcaggcattggccgagcac
ctgccggcgaccttgcacatccgctccgaggcgttcaagccggctggtgcgttgcctgac
accctgcaattgaacgcgctcgagctcgatgccaagggcgatctgctcgatggctatcaa
ctgtctggcagggccagcctgccggccgagcagtcaccgatcgccttgctcctgtccggt
ctggtcgacagcaaaggcgccaggctcgatgccctggacctgaccgccagcgacagccaa
cgggtcaagctgcaagccacggctgactggcagcaaggcctgagcgccgatgcgcagctg
gactggcaggacttcccgtggttgcgcctgtacccactggagaccccgcctgaagtcacc
ctcaagcgcttcaatacccaggtgcattatcgtgatggcaattaccaggggactttcacg
ggggacttggacggcccggcaggagcgttcagcctggccagcccgttcgaaggtgacctc
acccaggtgaaactgccgcagttggcgctgagcgccggccagggcaaggctgccggcagt
gtcgccgtccgttttgccgacaccctggcctgggatgtcgacctgcagctctccgcgctc
gacccggcctattggctggccgaactgcccggtaccctggcggggccactgcgcagtaaa
ggcgaactgaaaggcgatacgcttaccctggatgcccagcttgacctcaagggccgcctg
cgtggccagccagccatgctcaaggccgaggcccagggggcagggcaaaactggaccctg
ggcacactggctatccagctgggtgacaaccgcatcaacggcagtggcagcgtgcaacag
cgcctggcggggcaaatcgaccttgacttgccgcgcctgggccagttgtggccaaggctg
caaggcggggtcaagggccggctggatgtcgccggcaccttgcaggccccgcaaggtacg
ctcaccctgcagggccagcgcttggctcagggcgaaaaccgcctgcagcagttggacctg
gatgcccgcctggacaacgcccaacgcggtgtagtcgggctcaaggcaaccggtatccac
ctgggtgataccgccttgggcacgttgcaggccaacggcaaaggcgacattcgccaacag
gccttgaccctggcgctggatggcccgcagctcaagctcgaccttggcctggatggccag
ttgaacaaaggtgactggcgcgggcgcctggccactggccgcatccaggccggtggccag
gactggcagttgcaggcgcccgcacgcctgcagcggctggccagcggccagcttgacttc
ggggcccactgctggcgctccggccaggccagcctgtgtggcgacgaccagcggctggcc
cccgaaccgcgcctgcgctaccacctcaagcagttcccgctgggcagcctggcccagtgg
ctgccgaaggactttgcctggcaaggcctgctcaatgccgatatcaacctggatatcccg
gccagcggccccaagggcactgtcgttgtcgatgccagtggcggcaccttgcgcgtgcgc
gacaaaggccgttgggtcgatttcccttaccaggccctgcgcctggacagcacgctggca
ccgcggcgcatcgatacgcgcctggcgtttcgcggtgagcgcctgggtgagctgaacgtc
aacgcccggctcgatccgctgggcaagaacaaaccgttgtcgggtgatttccgcctggcc
gggctggacctgtcggtggcccgcccattcgtgcccatggtcgaacgcctggccgggcag
ctcaatggcagtggtcggctttcaggcaccttgctggcacctcaggtcaacggcaacctg
atgctcagcggtggcgaagtcagtggcgccgagctgccggccagccttcaggacctgtca
ttgcaggcgctgattgccggcgagcaggtgcagctcaacggtaactggcgcagtggcgag
gcgggacgtggccagttgagcggcaacctcacctgggggcaggcactgggcatggacgtg
cgtctgcaaggccagcaactgccggtcgcggtcgagccctacgccacactggaagttgcc
ccggacctgaccttgcgcctgatcgatgacaagctggcggtgaccggcaaggtgcaggtg
cccaagggcaagatcactgtacgagagctgccgccgtccacggtcaaggtgtcggatgac
acggtaatcgtcggtcaccagaccgaggaaggcaaaccacccatggcaatggccatggac
atcgatgtcgaagtcggccgcgacaagctgtcgttcagcggcttcgggctgactgccaac
ctgctgggtcatgtgcacatcggcgataacctcgatacccgtggcgaactgagcctggca
gatggccgctaccgtgcctacggccagcgcctcaccatacgccgggcgcgcctgctgttc
gccggcccgattgaccagccatacctggacatcgaagcgatccgcaaggttgacgatgtg
atagccggcatccgcctgagcggcagcgccgagcagccgacgaccaaagtgttctcggag
ccggccatgagccaggagcaggcgctttcgtacctggtattggggcggccattgggcaat
accggcgaagataacaacatgctcgccgaggcggccctgggcctgggccttgccgggagc
gccggcataaccggcagcctggcgtcgagcctggggatcgacgactttcagctggatacc
gaaggttctggcaacagcaccagcgtggtcgccagcggtaaccttaccgagaaactcagc
cttcgttacggggtgggcgtgttcgaaccggccaacacgatcgcgttgcgttacaagctg
agcaagaaggtttacctcgaggccgccagtgggctggcaagctctctggacatcttctac
aagcgcgacttctag
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