KEGG   Pseudomonas putida ND6: YSA_10112
Entry
YSA_10112         CDS       T02170                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi00300  Lysine biosynthesis
ppi00470  D-Amino acid metabolism
ppi01100  Metabolic pathways
ppi01110  Biosynthesis of secondary metabolites
ppi01120  Microbial metabolism in diverse environments
ppi01230  Biosynthesis of amino acids
Module
ppi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    YSA_10112
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    YSA_10112
Enzymes [BR:ppi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     YSA_10112
SSDB
Motif
Pfam: DAP_epimerase CntK_N
Other DBs
NCBI-ProteinID: AFK72256
UniProt: I3V3D5
LinkDB
Position
5428040..5428846
AA seq 268 aa
MQFVKYHAAGNDYLVYHDKTPFDCSMLAISVICDRHRGLGSDGILIPVIEPGKMLSVQIL
NTDGSEAEKSGNGLRILCRYLWDQRIVSHEPFELLTKGGKVRCQVLDDGRRISIAMGMAT
FPENERHSMEVDGMRLHLNLVSMGNPHCVVFVDQTTEALARKLGPTIEQLSLFPNRTNVQ
FVNVVDRRNLMVQIWERGVGYTLSSGTSSCAAAAVSRRLGFVDDHVTVHMPGGQITIELD
EDNHVLMKGPVCKIGKYWLDPECLAQIG
NT seq 807 nt   +upstreamnt  +downstreamnt
atgcagttcgtaaaatatcacgcggctggcaacgactatctcgtctaccacgacaaaacg
ccattcgattgctctatgctggccatctcggtgatatgcgaccggcatagagggttaggc
agtgacggcatcctgattcctgtaatcgagccaggcaagatgctctcagtgcagattctc
aataccgatggctccgaggcggaaaagagtggcaatggattgcgaatcctatgtcgctac
ctttgggatcagcgcatcgtttcgcacgaacccttcgagttgttaaccaaaggcggtaag
gttcgttgccaggtacttgacgacggccgacgcatttccattgccatgggtatggcgaca
ttccccgagaacgaacgacactcaatggaagtcgatggcatgcgcctgcacctgaacctt
gtgtcgatgggcaacccccattgcgtggtgtttgtcgatcagacgactgaggcacttgca
cgcaagcttgggccaaccattgagcaattgtcgctcttcccaaacagaaccaacgtgcaa
ttcgtgaacgttgtcgatcgccgaaacctgatggtgcagatctgggagcgtggcgtgggc
tacaccctatcttcaggcaccagcagctgtgccgctgcggcagtctcacgacgacttggg
ttcgttgacgatcatgtgacagtgcacatgcctggcggtcagatcaccatcgaacttgat
gaggacaaccacgtactcatgaagggcccggtgtgcaaaattgggaagtactggttggat
ccggagtgtctggcacagattggttga

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