KEGG   Pseudomonas putida ND6: YSA_10450
Entry
YSA_10450         CDS       T02170                                 
Name
(GenBank) OmpA/MotB domain-containing protein
  KO
K11891  type VI secretion system protein ImpL
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi02025  Biofilm formation - Pseudomonas aeruginosa
ppi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YSA_10450
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    YSA_10450
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppi02044]
    YSA_10450
Secretion system [BR:ppi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   YSA_10450
SSDB
Motif
Pfam: IcmF-related_N OmpA IcmF-related CcmD
Other DBs
NCBI-ProteinID: AFK72436
UniProt: I3V3W5
LinkDB
Position
complement(5582413..5584908)
AA seq 831 aa
MNKLKYYCLRYQPYLLGVAFFLAIFLVWAIGRAFGFASLHSLLAGIGVFLLLSAGYVLLL
YRGVGQHHNLEGLLRDDADQAVLSAAPADREEVSLLRERLLQGIERLHSNKPRGTSNKDA
LYALPWYLVIGQPAAGKSTMILQSGLNFPYAEREGVRVAGLGGTRNCDWFFSSEAVLLDT
AGRYMNSPEEAGKWRGFLQLLRQHRQRRPLNGLIVSVSIADILHGSVEDQERVAKRLRER
IQESCALLEVRLPIYLVFTKCDLIPGFTAFYRQLDDAARGEVMGKTFSHKGYEQADWGQR
FSNAMDELTRYWGQMASQQLVQQDIQVTRRNDAAYRFPLELAALKPRLHQFVDSLLRANP
YQNAEMLRGFYFTAALQADEAQWGCHGQHVAERFALEHAEGTGTAGSQPAPLFINSLFRK
VIIPDQHLVALYTSNHRERRRKAGWVGAAGLAALVLCSLWGWSYLNNRATLASIADELAQ
AKADDQAASGQYTAWRSLDRLRFWAAHYHEQHHAKGVPLSMRLGLYQGHEVEPLLRNRYF
ATLQNVMLKPTADNLTRTLYLLTTLKVYQRNTRELQPVSGIDSVEAEALPHDNRAQSIAN
FGKAALDTYVMLSPGQREHADPAFLKAHLPDYWYPAIARHTGKSMAAAGSEAGGNQDYLY
ASRQITFYSDQIREPDVPRILDNAFLMSSSRNYIDSLRAQSLRAIETITLESDTLFAFGR
ADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISGHADQLGDSQGNLQVSKQRAQTIRTYL
VGKGVPAELVVAQGEGSRKPLVNCDMQQPRTQLIKCLEPNRRVEIEVRGLN
NT seq 2496 nt   +upstreamnt  +downstreamnt
atgaacaagctcaagtactactgcctgcgctaccaaccctacctgctgggcgtggcattc
ttcctggcgatcttcctggtctgggccatcggccgagccttcggcttcgcctcgctgcac
agcctgctggccgggatcggcgtgtttctgctgctgtcggcgggctatgtactgctgctg
taccgcggcgtgggtcagcaccacaaccttgaaggcctgctgcgcgacgacgccgaccag
gccgtactcagtgcagccccggccgaccgggaagaagtcagcctgttgcgcgagcgcctg
ctgcagggcatcgagcgcctgcacagcaacaagccgcgcggtacttcgaacaaggatgcc
ctgtatgccctgccctggtacctggtcattggccagcctgccgccggcaagagcacgatg
atcctgcagtcgggccttaacttcccctatgccgagcgcgaaggcgtgcgtgtcgcgggc
ctgggcggcacgcgcaactgcgactggttcttcagctctgaagcggtactgctggacact
gccgggcgctacatgaacagccccgaggaagccggcaagtggcgcggctttttgcaactg
ctgcgccagcaccgccagcgccgtccccttaatggcttgattgtcagcgtcagcatcgcc
gatatcctgcatggttcggtcgaagaccaggagcgcgtggccaagcgcttgcgcgaacgc
attcaggaaagctgcgcgctgctggaagtgcgtctgccaatctacctggttttcaccaaa
tgcgacctgatccctggtttcaccgcgttctatcgccaactggacgacgcggctcgtggt
gaagtgatgggtaaaaccttctctcacaagggttacgagcaagccgactggggccagcgc
ttcagcaatgcgatggacgagctgacgcgttactgggggcagatggcgagccagcagctg
gtgcagcaggacatacaagtcacccggcggaacgacgctgcctaccgcttcccgctggag
ctggccgcgctcaagccgcgcctgcatcagttcgtcgacagcctgctgcgtgccaaccct
taccagaatgccgaaatgctgcgcggtttctatttcaccgcggcgctgcaggccgacgag
gctcagtggggctgccacggccagcatgtggccgaacgcttcgcgctcgaacacgcagaa
ggaacgggcactgccggcagccagccggcgccgctgttcatcaacagcctgttccgcaaa
gtgatcattcccgaccagcatttggtggcgctgtacaccagcaaccaccgtgaacgccgg
cgcaaggccgggtgggtgggcgctgccggcctggcggcactggtgctgtgcagcctgtgg
ggctggtcgtacctgaacaaccgcgccaccctggccagcattgccgacgaactggcccag
gccaaggccgacgaccaggcggccagcggccagtacaccgcctggcgaagcctcgaccgc
ttgcgcttctgggctgctcactaccatgagcaacaccacgctaagggcgtgcccctcagc
atgcgcctgggcctgtaccagggccatgaggtcgagccgctgctgcgcaaccgctacttc
gccacgctgcagaatgtaatgctaaagcccacggccgataatctgacccgtaccctgtac
ctgctgaccacgctcaaggtctaccagcgcaacacccgtgagctgcagccagtgagcggc
attgacagcgtagaggccgaggcgctgccccatgacaaccgcgcccagtcgatcgccaat
ttcggaaaggcggccctggacacttacgtgatgctttctccgggccagcgcgagcatgcc
gacccggcgtttctcaaggcgcacctgccggactactggtacccggccatcgcccgccat
accggcaaaagcatggccgccgccggcagcgaggccggtggcaaccaggactacctgtat
gccagccgccagatcacgttctacagcgaccagatccgtgagccagatgtaccgcgcatc
ctcgacaacgccttcctgatgtccagttcgcgcaactacatcgacagcctgcgggcccag
tcactgcgtgccatcgagaccatcacgctggagtccgacaccctgttcgccttcggccgc
gccgacttccagagcctgaaaaacgaaggccagcatcagctgagcgcaattgccagcaag
ctgctgaacaccccgaatatcggcaagatcatcatctcggggcacgccgaccaactgggt
gacagccagggcaacctgcaggtttcgaaacaacgggcgcaaaccatccgcacctatctg
gttggcaagggcgtacctgccgagctggtggtcgcgcagggcgaaggcagccgcaagcca
ttggtcaactgcgacatgcaacaaccgcgaacgcagttgatcaagtgcctggagcccaac
cgccgggtggaaatcgaagtgcgtgggcttaactga

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