Pseudomonas putida ND6: YSA_10459
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Entry
YSA_10459 CDS
T02170
Name
(GenBank) hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
YSA_10459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppi02044
]
YSA_10459
Secretion system [BR:
ppi02044
]
Type VI secretion system
Imp/Vas secretion system core components
YSA_10459
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AFK72440
UniProt:
I3V3W9
LinkDB
All DBs
Position
complement(5590357..5591700)
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AA seq
447 aa
AA seq
DB search
MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAEATLRSTPFHWGVQALQVDEDALANGSL
QLKRLKLVFPDGSLYDAPQHDPLPAARDLKDLLKANDLKVYAALKLPEPFGLNYVEDGHE
HKAARRFRKQFDTLPDLNEGELENEITSLRLNVVLLVDGDSLDGYSHCPLAKLTRNSMGG
FNVDPHFVHPTLHLGSHETIAGIGKRLLGALQAKSKALSGRRRERADQIAEFGSSDVTLF
WLLNTVNRAHPQLAHLLAHPRLHPERLYLFLADLAGGLLTFTLDTQLSDIPEYDHHDPAA
SLVKLDEMIRVMLDNVVPNQCIVINLTQTKPSHWQGQLHDPRLAEADFYIAVHADMPGAS
LLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHAARLPNAIPVRLDNQYFAIEPHGTVYER
MISAQAICFYAPSAFTNLKLELMAVLK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagagccgggtgatgtggtcggaaggcatgttcctgctgccccagcacttc
cagtatcaggacgaattccatcagcaccagttggctgaggcgaccctgcgcagcacccct
ttccattggggggttcaggcgctgcaggtggacgaggacgccctggccaatggttcactg
cagctcaagcgcctgaagctggtgttccccgatggcagcctctacgacgcgccgcagcac
gatccgctgccggccgcgcgcgacctcaaggacctgctcaaggccaacgacctgaaggtg
tatgccgcgctcaagctgcccgagccattcggcctcaactacgtcgaggatggccatgaa
cacaaggccgcacggcgtttccgcaagcagttcgacaccctgcccgaccttaatgaaggc
gaactggaaaacgaaatcaccagcttgcgcctgaacgtcgtgctgctggtcgacggtgac
agcctcgacggttacagccactgcccactggccaagctgacacgcaacagcatgggcggt
ttcaacgttgacccacatttcgtccaccccaccttgcacctgggcagccacgagaccatt
gccggcatcggcaagcgcctgctcggcgccctgcaggccaagagcaaggcgctttccggc
cgacgccgcgagcgcgccgaccagatcgccgagttcggctccagcgatgtgaccctgttc
tggctgctgaacacggtcaaccgtgcccacccgcagctggcgcatctactggcccacccg
cgcctgcacccggagcgcctgtacctgttcctggcggaccttgccggcggcctgctgacc
ttcaccctggacacccagctcagcgacatccccgagtacgaccaccacgacccggccgcg
tcgctggtcaagctcgacgaaatgatccgggtgatgctcgacaacgttgtgcccaaccag
tgcattgtcatcaacctgacccagaccaagccatcgcactggcaaggccaactgcacgac
ccgcgcctggccgaagccgacttctatatcgccgtgcacgccgacatgcccggcgccagc
ctgctggagctggtgccccgtgccttcaaggtcggttcgccggaagacattgaagtggtg
gtcaacagcgccatgccgggtgtcaccctcaatcatgccgcgcggctgccgaacgcaatt
ccggtgcgcctggacaaccagtacttcgccatcgagccacacggcactgtgtatgagcga
atgatcagcgcccaggccatctgcttctatgcgcccagcgcctttaccaacctcaagctt
gaactgatggcggtgctcaaatga
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