Pseudomonas putida ND6: YSA_10493
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Entry
YSA_10493 CDS
T02170
Name
(GenBank) YD repeat-containing protein
Organism
ppi
Pseudomonas putida ND6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
AHH
TEN_YD-shell
Nkap_C
Motif
Other DBs
NCBI-ProteinID:
AFK72455
UniProt:
I3V3Y4
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All DBs
Position
5606290..5610492
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AA seq
1400 aa
AA seq
DB search
MFEAARFGDEISHTSALGGFLIGAALGIALVATVAIATFTCGFGVALLAGLAAGIGGSLL
TAAGEAIGSMFSSPSGTITTASPNVFINSRKAARVEKSIGACDKHPGPVQIAEGSTNVFI
NSVAAARKGDKLTCGATISGGSENVIIGGGTYRYLPVDDEVPEWLRTTVDVLMAIAGAAG
GIAQLIKAGTQAGMKAVMPCALKFTAGFVAGEVASRYVVEPVARKAIGGLVGNPVDLTTG
RKLIPDEIDFSLPGLMPIEWSRFYASDLTVDSVLGRGWVLPWEQSLRRQGAFIYLTDNQG
REVPFVTLQPGQRIYNPHEQVYLVCTEGGHYILQTLDNLFFYFGEVPDTNTEVPLQRIEN
VLGHFLHFTRTPDGTLTDISATGGTRVHLHYDNPLGRLTDIKRVVNNEAVETLTQYRYDE
HGQLSAVINRNGDTVRSFSYADGLMVTHSNALGLGCHYRWQTLGDKPRVVEHWTSDGEHY
HFRYDLDSRTSWATDVLGRELEVRYNADHRVVASRDYGGERYAIELDEHGNMVGLTLPDG
NRLQFKYDEFSRLLEETDPLGRKTTYEYHHLTTLVTQVSYPDGSTWRARYDDKGNLLAEF
DALGQMTEYLNSDDGLPHTIIDATYKSKYLWWNTLAQVERYQDCSGKSTYYRYDERQHLV
AVTDALNQTTTLARKPDGEVLRISHPDGTTETFTYNVYGQVLSHTDGKGQTTRLMRTARG
LPSSRQDAKGQRVRYEYDKAIRLTALVNENNATYSFAYDASDRLSEEVRVDNLTRRFSYD
VGGHLTRLDEIGYGENAERPERHTLFERDAIGRLIAKLNSDARQDFVYDDGDRLLSIERQ
PTGIGKQLGITEEKLEYTYDMLGRLTKEITPDGTLGYEYDPLSNLTTLTLPDGRKVNHLY
YGSGHLHQLNLDGQVISDMERDDLHREVYRTQGKLTSCFGYDAMGRKAWQFASTLPADKL
SQVHNTGINTSLLVEHAYNPIHRRYQYDPAGELVRTLDKLRGEIKYEYEANGQLRSRDTG
SLIGSEEFRYDPAANRLDFNARQFDKVKDNRIKQWRDQEYRYDPWGNLIEKRSGHSKLQH
FSYDCENRLVRAETLVNGKLESQGEYRYDSLGRRIAKQAEINGEVEQKRFLWQGLRMLRE
ETPGQSILYLYEPGSYAPLARVDRVEGEGQKVYYFHTDQIGTPLELTDSEGEIVWQATYR
SWGEIEQLAVNEVEQNLRFQGQYFDAETGLHYNTFRFYVPEIGRFLTQDPIGLAGGDNLY
QYAPSPIGWIDELGLSCNSDAKLLRKELGISPQGGGQYDAHHIVMSNSKDARMIALRKKM
DELDIDINDKRNGIWLPNTESARVPGTTATPHKGAGVHGKAYKQYVFDKLSVANGREEFL
SALSEVKQSLFDGISFKTIR
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagcggccaggttcggcgacgagatatcgcacaccagcgcgctggggggcttc
ctgatcggggccgccctggggattgcgctggtggccacggtggccattgccacgttcacc
tgcgggttcggcgtggctttgctggccggcctcgcagccggcatcgggggcagcttgctg
accgccgccggagaggcgataggcagtatgttctcgtccccctcagggacgataaccact
gcctcacccaacgtgttcatcaacagccgcaaggccgcccgcgtcgaaaaaagcatcggt
gcctgcgacaagcacccagggccggtgcagattgccgaaggctcgaccaacgtcttcatc
aacagcgtcgccgccgcgcgcaagggcgacaagctgacctgcggcgccaccatttccggt
ggttcggagaacgtcatcatcggcggcggcacctaccgttacctgcccgtggacgatgaa
gtcccggagtggctgcgcaccaccgtggatgtgctgatggccatcgccggtgccgcaggc
ggtatcgcccagctgatcaaggcgggtacccaggccggcatgaaagccgtcatgccttgc
gcgctgaagttcacggccggcttcgtcgccggtgaggtggccagccgttacgtggtcgaa
cccgtggcccgcaaggctatcggcggcctggtcggcaaccccgtcgacctcacgacgggc
cgcaagctgatccccgatgaaatcgacttcagcctgccgggcctgatgccgatcgagtgg
tcgcgcttctacgccagcgacctgacggtcgacagcgtactcggccgcggctgggtgctg
ccctgggagcagagcctgcgccgccagggggcattcatctacctcaccgacaaccagggc
cgcgaagtcccgttcgtgaccctgcaaccggggcagcgcatctacaacccgcacgaacag
gtgtacctggtgtgcaccgagggcggccactacatcctgcagaccctcgacaacctgttc
ttctactttggcgaagtgccagacaccaacaccgaagtgccgctgcagcgtatcgagaac
gtcctcggccacttcctgcacttcacccgcacgcccgacggcacactgaccgacatcagc
gccaccggcggcacccgcgtgcacctgcactacgataacccgctgggtcgcctgaccgac
atcaagcgcgtggtgaacaacgaagcggtggaaacgcttacccagtaccgctacgacgaa
cacggccagctgagcgcggtgatcaaccgcaacggcgacaccgtgcgcagcttcagctac
gccgacggcctgatggtgacccacagcaacgcgctggggctgggctgccactaccgttgg
caaaccctgggcgacaagccacgtgtggtcgaacactggaccagcgacggcgagcactac
cacttccgctacgacctcgatagccgcaccagctgggccaccgacgtgctcggccgcgag
ctggaagtacggtacaacgccgaccaccgcgtggtcgccagccgcgactatggcggcgag
cgttacgccatcgagctggacgaacacggcaatatggttggcctgaccttgccggacggt
aaccgcctgcaattcaagtacgacgaattctcccgcttgctagaagagaccgacccgctg
ggccgcaagaccacctacgaatatcaccacctgaccacgctggtgacccaggtcagctac
ccggatggcagcacctggcgagcgcgttacgacgacaagggcaacctgctcgccgaattc
gatgccctcggccagatgaccgagtacctgaacagcgatgacggcctgccgcacaccatc
atcgatgcgacctacaagtccaagtacctgtggtggaacaccctggcccaggtcgagcgc
taccaggactgctcgggcaagagtacgtactaccgctatgacgaacgccagcacctggtc
gcggtaacagacgcgctgaaccagaccaccacgctggcgcgcaagcccgacggcgaagtg
ctgcgcatcagccacccggacggcaccacggaaacctttacctacaacgtctacggtcag
gtgctcagccacaccgacggcaagggccagaccacccgcctgatgcgcacggcccgtggc
ctgccgagcagccgccaggatgccaagggccagcgggttcgctacgagtacgacaaggcc
attcgcctgaccgcgctggtcaacgagaacaacgccacgtacagctttgcctacgacgct
tcggaccggctgagcgaagaagtgcgggtggataacctgacccggcgtttcagctacgac
gtcggtggccatctcacacgactggatgagattggctatggcgaaaatgccgagcggccc
gagcgccatacgctctttgagcgtgatgccattggccgtttgattgccaagctcaatagc
gatgcgcggcaagacttcgtctacgacgacggcgaccggctgctgagcatcgagcggcaa
ccgaccgggatcggcaagcagcttgggatcacagaagaaaagctggaatacacctacgat
atgctcggccgtctgaccaaagaaatcacccctgacggcacgcttggctacgagtacgac
ccgctcagcaacctgaccacgctgaccctgccggatgggcgtaaggtcaatcacctgtat
tacggcagtggccacctgcaccagctgaacctggatggtcaggtgatcagtgacatggag
cgcgatgacctgcaccgtgaggtgtaccgcacccaaggcaagctcaccagttgcttcggt
tatgacgccatggggcgcaaggcctggcagtttgcctcgaccttgccggccgacaagctc
tcgcaggtgcacaacaccggcatcaatacctcgttgctggtcgagcacgcctacaacccg
atccaccgccgttatcagtacgacccggcgggtgaactggtgcgtaccctcgacaagtta
cgcggcgagatcaagtacgaatacgaagccaacggccagttgcgcagtcgtgataccggc
tcgttgatcggcagcgaggagttccgctacgacccggcagccaaccgcctggacttcaat
gcgcggcagttcgacaaggtcaaggacaaccggatcaaacagtggcgggatcaggagtat
cgctacgacccgtggggcaacctgatcgagaagcgctcggggcacagcaagctgcagcat
tttagctatgactgcgagaaccggctggtgcgggcggagacgttggtcaatggcaagctg
gaaagccaaggcgagtatcgttacgacagcttggggaggcgaatagccaagcaggctgaa
atcaatggcgaggtcgagcagaagcgcttcctctggcaggggctgaggatgctgcgggag
gaaacgccagggcagagcatcttgtacctgtacgagccgggtagctatgcgccgttggcg
cgggttgatcgggttgaaggggaagggcagaaggtctattacttccatactgaccagatt
ggaaccccgctggagctgaccgatagcgagggtgagattgtctggcaggcgacatatcgc
tcgtggggtgagatagagcagctagcggtcaatgaggtggagcagaacctacgcttccaa
ggtcagtactttgatgccgaaacggggctgcactacaacacgttccgattctatgtccct
gaaatcgggagatttctgacacaagaccccatcggtctagcaggtggagataatttatat
caatatgcacctagccctatagggtggatcgatgaactaggtctgtcgtgcaactcagat
gccaagcttcttcgaaaagaactcgggataagtccacaggggggaggtcagtatgatgcg
catcatattgtgatgtccaactcgaaagatgcgaggatgattgcactccggaaaaagatg
gatgaattggacattgatataaatgataagcgtaatgggatttggctgcccaataccgag
tctgcaagggttccaggtacaactgccacccctcacaaaggtgcgggtgtgcacggcaaa
gcctataagcaatatgtgtttgataagctttccgtagccaatggtcgagaggaatttctc
agcgcactttccgaggttaagcagtcgctgtttgatggtatttcatttaaaacgataagg
tag
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