Pseudomonas putida ND6: YSA_11364
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Entry
YSA_11364 CDS
T02170
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
ppi
Pseudomonas putida ND6
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GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
VpsR
AAA_5
HTH_8
AAA_16
HTH_29
HTH_17
AAA_2
Mg_chelatase
HTH_23
AAA
AAA_3
HTH_50
AAA_7
AAA_22
HTH_28
nSTAND6
HTH_22
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFK72938
UniProt:
I3V5B7
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Position
complement(6082483..6083808)
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AA seq
441 aa
AA seq
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MQQPAAQRRLLIVDPCDDCHRLLPGLRNAGWDVDSCMLGAALDHTCDVGLLRLQASHLRH
PDAVKDMIKRSNTEWIAVLSADQLRMPAFGDFVCEWFFDFHTLPFDVSRVQVTLGRAFGM
ARLRGKGAVKVDEATHELLGESRPIRELRKLLGKLAPTESPVLIRGESGTGKELVARTLH
RQSQRSEQPFIAINCGAIPEHLIQSELFGHEKGAFTGAHQRKTGRIEAADGGTLFLDEIG
DLPLELQANLLRFLQEKHIERVGGSQPIPVDVRVLAATHVDLERAIEQGRFREDLYYRLN
VLQVVTAPLRDRHGDLSMLANHFAHFYSVETGRRPRSFSDHALAAMGRHDWPGNVRELAN
RVRRGLVLAEGRQIEAQDLGLQLLDPEQQPLGTLEEYKQRAERQALCDVLNRHSDNLSVA
AKVLGISRPTFYRLLHKHQIR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctgccgctcaacgccgtttgcttatcgtcgacccctgcgacgattgccac
cgcttgttacctggcctgcgcaacgcaggctgggatgtggacagctgtatgctcggggcc
gcgctggaccacacgtgcgatgtcgggctattgcgcttgcaggcttcgcacctgaggcac
ccggacgcggtcaaggacatgatcaagcgcagcaacaccgaatggattgccgtgctcagc
gccgatcagttgcgcatgccggcgttcggtgattttgtgtgtgagtggtttttcgacttc
cataccctgccgttcgacgtctcccgcgtgcaggtaaccctgggccgggccttcggcatg
gcgcgcttgcgcggcaagggggccgtcaaggtcgatgaggcaacccatgagttgctcggc
gaaagccggcctatccgcgagttgcgcaagttgctgggtaaactggcacccaccgaatcg
cctgtgctgatccgcggagaaagcggcaccggcaaagagctggtggcgcgcaccttgcac
cgccagtcgcaacgcagcgagcaaccgttcatcgcgatcaactgcggggcgatccccgag
cacttgatccagtccgaactgttcggccatgagaagggcgcctttaccggtgcccaccag
cgcaagaccgggcgtatcgaagcggccgatggcggcacattgtttcttgatgaaatcggc
gacctgccgttggaattgcaggccaacttgctgcgttttttgcaggagaagcacatcgag
cgggtgggtggcagccagcccataccggtggatgtacgggtgctggcggccacccatgtg
gacctcgagcgggccatcgagcaagggcgtttccgcgaagacctgtattaccgcctgaac
gtcttgcaggtggtgaccgcgccgttgcgcgaccggcatggtgacctgtcgatgctggcc
aaccattttgcccatttctacagtgtggagaccgggcgtcggccacggtcgttcagcgac
catgccctggcggcgatggggcggcatgactggccgggcaatgtgcgcgaactggccaac
cgcgtgcgccgcgggttggtgctggccgaagggcggcagatcgaggcgcaagacttgggg
ttgcaactgctcgacccggaacaacaaccgctgggcacgctggaagaatacaagcagcgc
gccgagcgccaggcgctgtgcgatgtgctcaaccggcacagcgacaacctgagcgtggcg
gccaaggtgctgggcatttcacggccgacgttctatcggttgttgcacaagcaccagata
cgctga
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