Phaeobacter piscinae: PhaeoP14_00002
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Entry
PhaeoP14_00002 CDS
T05105
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03030
DNA replication
ppic03430
Mismatch repair
ppic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP14_00002 (dnaN)
03430 Mismatch repair
PhaeoP14_00002 (dnaN)
03440 Homologous recombination
PhaeoP14_00002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppic03032
]
PhaeoP14_00002 (dnaN)
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_00002 (dnaN)
Enzymes [BR:
ppic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PhaeoP14_00002 (dnaN)
DNA replication proteins [BR:
ppic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PhaeoP14_00002 (dnaN)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PhaeoP14_00002 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ATG38143
UniProt:
A0AAN1GND0
LinkDB
All DBs
Position
1738..2859
Genome browser
AA seq
373 aa
AA seq
DB search
MKISIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDTVQFRATDLDIEVVDKAPAQ
VERAGATTVAATTLHEIVRKLPDGALVTLTADAASGRLTVEAGRSNFSLATLPREDFPVM
ASSEYHSNFTANAAVLQRLFDKSKFAISTEETRYYLNGVYMHVADGVEGGKALRCVATDG
HRLARIDANLPMGAEDMPGVIVPRKTVGELRKLLDDDEMDIAVSVSETKVRFATPNITLT
SKVIDGTFPDYTRVIPAGNTRRLEVDASEFARAVDRVATVSSERSRAVKLQLDEDRLILS
VNAPDSGAAEEELAVAYRDERLEIGFNAKYLLEIANQVDRENAVFMFNSSGDPTLMREGS
DESAVYVVMPMRV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcagcatcgaacgcggcaccttgttgaaagccgtggctcaggcccagtcagtg
gtcgagcgccgcaacaccattccgatcctggcaaatgtgctgattgaggccgaaggggac
accgttcagttccgcgccaccgatctggatattgaggtggtcgacaaggccccggcccag
gtcgaacgcgcaggcgccaccaccgttgccgccaccacgctgcatgagattgtgcgcaaa
ctgcccgatggcgcgctggtcaccctgaccgcagatgccgccagcggtcgtctgacagtg
gaggccggccgctcgaacttctcgctggccaccctgccgcgtgaagatttcccggtgatg
gcctcctccgaatatcactccaacttcaccgccaatgcagccgtcctgcagcggctgttt
gacaagtcgaaattcgccatctccaccgaggagacccgctactatctgaacggtgtctat
atgcatgtcgcggatggtgtcgaaggcggcaaggcgctgcgctgtgtcgccaccgacggt
caccgtctggcgcggatcgatgccaatctgccgatgggtgccgaggatatgcccggtgtg
atcgtgccgcgcaaaaccgtgggcgagctgcgtaagctgctggacgacgatgagatggac
attgccgtttctgtctctgagaccaaagtgcgctttgccacgcccaatatcaccctgacc
tcgaaggtgatcgacggcaccttccccgactacacgcgggttatcccagcaggcaacacc
cgccgtctggaagtggatgcctccgaatttgcccgtgctgtggaccgggtcgcaaccgtg
tcctccgaacggtcgcgcgcggtgaagctgcagctggacgaggatcggctgatcctttct
gtcaacgcacccgacagcggtgcggctgaggaagagctggcagtggcctatcgtgacgag
cggctggagatcggtttcaatgcaaagtatctgcttgagatcgccaatcaggttgatcgt
gaaaatgcggtcttcatgttcaattcatccggtgacccgaccctgatgcgggaaggcagc
gacgaaagcgcggtttatgtcgtcatgccgatgcgggtgtga
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