Phaeobacter piscinae: PhaeoP14_00070
Help
Entry
PhaeoP14_00070 CDS
T05105
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03030
DNA replication
ppic03410
Base excision repair
ppic03420
Nucleotide excision repair
ppic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP14_00070 (polA)
03410 Base excision repair
PhaeoP14_00070 (polA)
03420 Nucleotide excision repair
PhaeoP14_00070 (polA)
03440 Homologous recombination
PhaeoP14_00070 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppic03032
]
PhaeoP14_00070 (polA)
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_00070 (polA)
Enzymes [BR:
ppic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PhaeoP14_00070 (polA)
DNA replication proteins [BR:
ppic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PhaeoP14_00070 (polA)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PhaeoP14_00070 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PhaeoP14_00070 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
ATG38205
LinkDB
All DBs
Position
complement(83448..86261)
Genome browser
AA seq
937 aa
AA seq
DB search
MTTTPFGTGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGP
DAPTHVAVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEQEGF
EADDIIATLACQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDSDGVFEKFGVG
PDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLENLLDRAEEIKQPKRRQTLIE
NRAQIELSKQLVQLDNNMELGFTLDDLGVRDPNADQLLSFLAEMEFRTLSKRVADQLGKE
APAIVDAPAQSADAAEAPTVADIPFDSGSYECVRDAEALKKWVTQIRERGWVAVDTETTG
FDEMVVDLVGISLCVEPGRACYIPLTHKSGGSDDLFGSDDLADGQMPLQDALDLLKPVLE
DDSILKIGQNMKYDAKIFARRGIDVAPIDDTMLMSYAMHAGQHGHGMDTLSERYLNHTPI
PIKPLLGTGKSAITFDRVPIDDAVAYAAEDADITLRLWQLFKPQLHQAGVTTVYETLERP
LVPVLARMEREGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGQSFNVGSPKQLGEILFD
KLGMEGGKKGKTGAYATGADILEDLATEHALPGLVLDWRQLSKLKSTYTDALQDHINAET
GRVHTSYVQTGANTGRLASTDPNLQNIPIRSEEGRRIREAFVPEEGNVLLALDYSQIELR
ILAHVAGIDTLKQAFAEGQDIHALTASEMFNVPLEEMTPDIRRQAKAINFGVIYGISGFG
LARNLRIPRAEAQGFIDRYFERFPGIRRYMDETVAFAKEHGHVQTLFGRKIHTPEISAKG
PRAGFAKRAAINAPIQGTAADVIRRAMIRMPAAIAHLPARMLLQVHDELLFEVPEAAVED
TIETARRVMETAADPAVHLDVKLVVDAGRGQNWAEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactccctttggcaccggctgccacctgcatctgatcgacggatcggccttc
atctttcgcgcctatcacgcgttgccgcctctcacccgcaaatccgacgggctgcccatc
ggcgctgtggcgggattctgcaacatgttgcaccgctatgttgagggcaacaccggccca
gatgccccaacccatgttgcggttattttcgacaagggatcgcacaccttccgcaatgat
ctttatgatcaatacaaggccaaccgcgaagccatgcccgaagatctgcgcccgcagatt
cccctgacccgcaccgccaccgaggcgttcaatatcgcctgcaaggaacaggaaggattc
gaggccgacgatattatcgccacgcttgcctgccaggcccgcgatgcaggcggccgggtg
acgattatctcctctgacaaggatctgatgcagctggtcggcggtggggtcgaaatgctg
gacgcgatgaagaacaaacgcatcgacagcgatggtgtcttcgagaaatttggtgtcgga
ccggaccgtgtggtggatgtccaggcgcttgctggcgattcggtcgacaacgtacccggc
gcgccggggatcgggattaagacagccgcgctgctgatcaacgaatacggttcgctagaa
aatctgctagaccgcgccgaagagatcaaacaacccaagcgtcgccagaccctgatcgag
aaccgcgcgcagatcgaactgtcgaagcagctcgtccagctggacaacaatatggagctg
ggtttcacgctggatgatctgggcgtgcgcgaccccaatgcagaccagctgctcagcttt
cttgctgagatggaatttcgcactctgtccaagcgtgtcgccgatcaattgggtaaagag
gcgccagccatcgtcgacgcccccgcgcaaagcgctgacgcagccgaggcgccgaccgtg
gcggatatccccttcgacagcggcagttatgaatgcgtccgtgacgccgaggcgctgaaa
aaatgggtgacccagatccgcgaacgtggctgggtggcggtggacacggaaaccactggt
tttgacgagatggtggtggatcttgtgggcatctcgctctgcgtggaaccgggccgcgcc
tgttacattccgctcacccataaatccggcggcagtgatgatctcttcggttcggacgat
ctggcggacgggcagatgccgctgcaggacgcacttgatctgctgaagcccgtgcttgag
gacgacagtatcctcaagattggccagaatatgaaatatgacgccaagatttttgcccgc
cggggcatcgatgtggcgccaatcgatgacacgatgctgatgtcctatgcgatgcacgca
ggccagcacgggcacggcatggacacgctgtcggaacgctatctgaaccacacgccgatc
ccgatcaaaccgctgctgggcaccggcaaatccgcaatcacctttgaccgcgtgccgatc
gacgatgccgtcgcctatgccgctgaggacgccgatatcaccctgcgtttgtggcagctg
ttcaaaccacagttgcatcaggcgggcgtcaccacggtctacgagacgctggaacgcccg
ctggtgcccgtgctggcccggatggagcgcgagggtatcaaggtagatcgcgatacgctg
tcgcgcatgtccaacgcttttgcccagaaaatggctgggctggaggccgaaatacatgag
ctggccggccaaagcttcaacgtcgggtcccccaaacagctgggcgagattctgtttgat
aagcttggcatggaagggggcaagaagggcaagacaggggcctatgccaccggggcggat
attcttgaggatctcgccaccgaacacgccctgccgggtctggtcttggactggcgccag
ctgagcaagctgaaatcgacctataccgatgcgcttcaggatcatatcaacgccgaaact
gggcgcgttcacacctcctatgtgcagaccggggccaacaccgggcgtctggcctcgacc
gatcccaacctgcagaatatccccatccgctccgaggaagggcgccgcatccgcgaggcc
tttgttccggaggagggcaatgtgctgctggcgctggactacagccagattgaattgcgt
atcctggcccatgtcgccgggattgacaccctcaaacaggcctttgccgaggggcaggac
atccatgcgctgaccgcatcagagatgttcaacgtcccgctggaggagatgacaccggac
atccgccgacaggccaaggcgatcaactttggcgttatttatggcatctccggctttggt
ctggcgcgcaacctgcgcattccacgggccgaggcgcagggcttcatcgaccgctatttc
gagcggttccccggcattcgccgctatatggatgagacggttgccttcgccaaggagcac
ggccatgtgcaaaccctgttcgggcgcaagatccacacgccggagatctccgccaaggga
ccgcgcgccggctttgccaaacgcgccgcaatcaatgcgccaatccagggcaccgcagcc
gatgtgatccgccgcgcgatgatccggatgcctgccgccatcgctcacttgcctgcacgg
atgctgctgcaggtgcacgacgaactgctgttcgaggtgccagaagccgccgtggaagac
accatcgaaaccgcccgtcgcgtgatggaaaccgcggcagacccggcggttcatctggac
gtgaaactggtggtggatgccggcaggggacagaactgggcagaggcccactag
DBGET
integrated database retrieval system
