Phaeobacter piscinae: PhaeoP14_00279
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Entry
PhaeoP14_00279 CDS
T05105
Symbol
sucD
Name
(GenBank) succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00020
Citrate cycle (TCA cycle)
ppic00640
Propanoate metabolism
ppic00660
C5-Branched dibasic acid metabolism
ppic00720
Other carbon fixation pathways
ppic01100
Metabolic pathways
ppic01110
Biosynthesis of secondary metabolites
ppic01120
Microbial metabolism in diverse environments
ppic01200
Carbon metabolism
Module
ppic_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppic_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PhaeoP14_00279 (sucD)
00640 Propanoate metabolism
PhaeoP14_00279 (sucD)
00660 C5-Branched dibasic acid metabolism
PhaeoP14_00279 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
PhaeoP14_00279 (sucD)
Enzymes [BR:
ppic01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PhaeoP14_00279 (sucD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ATG38411
LinkDB
All DBs
Position
complement(310380..311264)
Genome browser
AA seq
294 aa
AA seq
DB search
MAVLIDENTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGQTHLNLPVFNSVHEA
KHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVKRALEDSKSRLI
GPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTADIGLGQSTAVGIGG
DPIKGTEHIDVLDMFLNDDETQSIIMIGEIGGSAEEEAAEFIAEQKKKGRWKPIAGFIAG
RTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIVVADSPATLGEAVLKAIGK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcctcatcgacgaaaacaccaaggtcatctgtcagggcttcaccggctcgcag
ggcacattccactccgaacaggccatcgcctatggcaccaagatggtcggcggcgtgaca
ccgggcaagggtggccagacccacctgaacctgccggtcttcaactccgtgcatgaagcc
aagcatgtgaccgaggcgaatgcctctgtgatctacgtgccgccccccttcgcagctgac
tccatccttgaggccatcgatgccgagatggagttgattgtctgcatcaccgagggcatc
ccggttctggacatgatgaaagtcaagcgggcgctggaagacagcaaatcgcgcctcatt
ggcccgaactgccccggcgtgatcacgcctgatgcctgcaagatcggcatcatgcctggc
cacatccacaagcgtggctcggtcggtgttgtgtcccgctcgggcaccctgacctatgag
gcggtgaagcagaccgcagacatcggtctgggccagtccaccgctgtcggcatcggcggc
gacccgatcaaaggcaccgagcacatcgacgtgctggacatgttcctgaacgatgatgaa
acccagtcgatcatcatgatcggtgaaatcggtggctccgctgaagaagaagccgcagaa
ttcatcgccgagcagaagaaaaaaggccgctggaagcccatcgcgggctttatcgcaggc
cgcacagcccctccgggccgccgcatgggtcacgctggcgcgatcgtcgcaggcggcaaa
ggtggtgccgaagacaagatcgaggcgatgaaatccgctggtatcgtcgtcgccgacagc
cccgccacactgggcgaggccgtgctgaaggccatcggcaaataa
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