Phaeobacter piscinae: PhaeoP14_00281
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Entry
PhaeoP14_00281 CDS
T05105
Symbol
sucC
Name
(GenBank) succinyl-CoA ligase [ADP-forming] subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00020
Citrate cycle (TCA cycle)
ppic00640
Propanoate metabolism
ppic00660
C5-Branched dibasic acid metabolism
ppic00720
Other carbon fixation pathways
ppic01100
Metabolic pathways
ppic01110
Biosynthesis of secondary metabolites
ppic01120
Microbial metabolism in diverse environments
ppic01200
Carbon metabolism
Module
ppic_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppic_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PhaeoP14_00281 (sucC)
00640 Propanoate metabolism
PhaeoP14_00281 (sucC)
00660 C5-Branched dibasic acid metabolism
PhaeoP14_00281 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
PhaeoP14_00281 (sucC)
Enzymes [BR:
ppic01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PhaeoP14_00281 (sucC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
LEDGF
Motif
Other DBs
NCBI-ProteinID:
ATG38413
LinkDB
All DBs
Position
complement(311738..312931)
Genome browser
AA seq
397 aa
AA seq
DB search
MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK
EADAGEKGGVRLTKSVEEAADEAKKMLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYL
ALLVDRQTSRISFVCSTEGGMDIEEVAEATPEKILSFSVDPATGYQAFHGRRIAFSLGLE
GAQVKQCVKLMGQLYKAFVEKDMEMLEINPLIVSDSGDLKVLDAKVGFDGNAVYRHADIS
ELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG
GGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE
GTNVEAGKDIINTSGLDVIAADNLSDGAEKIVKAVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccacgaatatcaggccaaggccctcctccgcagctacggcgcgccggtttcg
gacgggcgtgtggtgctcaaggcagaagatgccaaaaccgcagcaggtgaactggacggc
ccgctctgggtggtcaaagctcagatccacgctggtggtcgcggcaagggctccttcaag
gaggctgacgcgggcgaaaaaggcggcgtgcgcctgaccaaatcggttgaagaagccgct
gacgaagccaagaagatgctgggccgcacccttgtgacccatcagaccggtcccgccggt
aagcaggtgaaccgcatctacatcgaggcaggatccggcattcagaccgaactctacctc
gcgctgctggtggatcgccaaacctcgcgcatctcctttgtctgctccaccgagggcggc
atggacatcgaggaagtggccgaagccacccccgagaaaatcctgtccttctccgttgat
ccggcaactggctatcaggcgttccacggccgccgcatcgcattctcgctgggtcttgaa
ggcgcacaggtcaagcaatgcgtcaagctgatgggccaactctacaaggcatttgtcgaa
aaagacatggagatgctggaaatcaacccgctgatcgtctccgacagtggtgatctgaaa
gtgctggacgccaaggtcggctttgacggcaacgcggtttaccgccacgctgatatctcc
gaactgcgcgacaccaccgaggaagaccccaaggaactggaagcctccaaatacgatctg
aactacatcgctctggacggtgagatcggctgcatggtgaacggtgcgggcctggcgatg
gccaccatggacatcatcaaactctacggcgctgagcctgcgaacttccttgatgttggc
ggcggcgccaccaaagagaaagtgaccgaggcgttcaaaatcatcacctctgaccccaac
gtcaaaggcatcttggtcaacatcttcggcggcatcatgcgctgcgacgtcatcgccgag
ggtgtggtcgccgcggtgaaagaggtcggcctgaaggtaccgctggttgtccgtctcgaa
ggcaccaatgtggaagctggcaaagacatcatcaacacctccggtcttgatgtcatcgca
gccgacaacctgtctgacggcgccgagaaaatcgtgaaagcggttaagggttaa
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