Phaeobacter piscinae: PhaeoP14_00486
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Entry
PhaeoP14_00486 CDS
T05105
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppic03016
]
PhaeoP14_00486 (truA)
Enzymes [BR:
ppic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PhaeoP14_00486 (truA)
Transfer RNA biogenesis [BR:
ppic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PhaeoP14_00486 (truA)
Prokaryotic type
PhaeoP14_00486 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Spore_SspJ
Motif
Other DBs
NCBI-ProteinID:
ATG38616
LinkDB
All DBs
Position
complement(541367..542143)
Genome browser
AA seq
258 aa
AA seq
DB search
MPRFALKVEYHGAPFAGWQRQKDQPSVQGAIEDALARLEPGPHTIAAAGRTDTGVHGLGQ
VAHCDMVKDWDPFRLSEALNFHLKPAPVAIVDCARVEGDWHARFSAVERQYLFRILIRRA
PATHEAGQVWQLNHDLDADAMQEAANHLIGQHDFTTFRSSICQAASPLKTLDELRVERVQ
GFSGPEIHFHVRARSFLHNQVRSFVGTLERVGAGAWAPEDVKTALEAEDRAACGPVCPGH
GLYLARVGYPDDPFEIAE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgttttgctctgaaagtcgaatatcacggcgcgcccttcgccgggtggcagcgc
cagaaggatcagccctccgtacagggggcgatcgaggatgcgcttgcgcggctggaaccc
ggcccgcatacgattgcagcggcggggcgcacggacaccggcgtgcatggtctgggtcaa
gttgcgcattgcgacatggtgaaggattgggatccgttccgcctgtccgaggcgctgaat
ttccacctgaagccagcgcccgtggcgattgtcgattgcgcccgtgtggagggagactgg
cacgcgcgattttctgcggttgagcggcagtatctgtttcgcatcctgatccggcgcgcc
ccggcaacccatgaggccggacaggtctggcagctcaatcacgatctggacgccgacgcg
atgcaggaggcggccaatcatctgattggtcagcatgatttcaccaccttccggtcgtcg
atctgtcaggcggcaagcccgctgaagacactggacgaattgcgggttgagcgggttcag
ggtttttcagggccggagattcattttcatgtgcgcgcgcggtccttcctgcacaatcag
gtgcgcagctttgtcggcacgctggagcgggtcggcgcgggagcctgggcgcccgaggat
gtgaaaaccgcgctagaggccgaggatcgcgccgcctgcgggccggtctgccccggtcac
gggctctatctggcgcgcgtcggataccctgacgatccctttgagattgcggaatag
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