Phaeobacter piscinae: PhaeoP14_00608
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Entry
PhaeoP14_00608 CDS
T05105
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03030
DNA replication
ppic03430
Mismatch repair
ppic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP14_00608
03430 Mismatch repair
PhaeoP14_00608
03440 Homologous recombination
PhaeoP14_00608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppic03032
]
PhaeoP14_00608
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_00608
Enzymes [BR:
ppic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PhaeoP14_00608
DNA replication proteins [BR:
ppic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PhaeoP14_00608
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PhaeoP14_00608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ATG38734
LinkDB
All DBs
Position
complement(666790..667407)
Genome browser
AA seq
205 aa
AA seq
DB search
MANAASLSLPTCFKQAEPLSDNLRFIAVDVETAGYDIASICQIGLACVGFDNSIATYSAY
IDPGTPFAKGNTRLHGIDASTVKSAPKFAEVLPSLRPVLEAYPLIQHSRYDEKAFDAACR
LAGFQVLKSTWSDSVAIARQAWPELRGHGGHGLANLKKVLGLQFEHHDAEEDARAAAEVT
LKAEASMGRKIRMLSSSQQLTFDFQ
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgctgcatctttgtctttaccaacttgtttcaaacaggctgaaccactgagc
gacaatctgaggttcatagctgtagatgtcgagactgccgggtacgatattgcgagcatc
tgtcaaattggcctcgcttgtgttggatttgacaactcaatcgcaacttatagtgcctat
attgatcccggcactccctttgctaaaggcaatacgcgactgcatgggattgatgcttca
actgtcaaaagcgcccccaaatttgcagaagtattgccaagcctacgtccggttcttgag
gcatacccgcttattcaacacagccgatacgatgagaaagcctttgacgcggcgtgtcgg
cttgcgggatttcaagtgttgaagtcaacatggtcagacagcgttgcgatcgctcgccaa
gcttggccggaattacgcggccatggcgggcatggtctggccaatctcaaaaaggtgtta
gggcttcaattcgagcaccatgatgctgaagaggatgcacgtgctgcggctgaagttaca
ttgaaagcagaggcatcaatggggcgaaaaatcaggatgctgagtagttcacagcagttg
acctttgactttcagtaa
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