Phaeobacter piscinae: PhaeoP14_00876
Help
Entry
PhaeoP14_00876 CDS
T05105
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00470
D-Amino acid metabolism
ppic00550
Peptidoglycan biosynthesis
ppic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PhaeoP14_00876 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PhaeoP14_00876 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppic01011
]
PhaeoP14_00876 (murD)
Enzymes [BR:
ppic01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PhaeoP14_00876 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppic01011
]
Precursor biosynthesis
Amino acid ligase
PhaeoP14_00876 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ATG38990
LinkDB
All DBs
Position
939218..940615
Genome browser
AA seq
465 aa
AA seq
DB search
MIPVTGFEGATVAVLGLGRSGLATARALREGGAEPICWDDNPGARARAEVEGLTCRDLLK
SGAFDDIASLVVSPGIPHLYPKPNPVIRAAMIAGVPVDNDIGLFFRSVATRGWERFDQAP
RIVAVTGSNGKSTTVALLHHILQEAGRESQLAGNIGRGVLDIDPPGSGGIVVLELSSYQT
DLARALTPDVAVFTNLSPDHLDRHAGMGGYFAAKRRLFAEGGPDRAIIGVDEDEGLYLAG
QLSEAASDDRVIRISASRKLTGPGWQVFARKGFLSEYRKGRQAASIDLRQMQGLPGAHNH
QNACAAYAAARALGLAPRLIEDALASYPGLPHRSQTIATHAGVRYVNDSKATNLDSAVKA
LSAFDNIRWICGGLEKDGGLEALRGQTGKVRKAYVIGREAAGFAMQLDVEAEVCITMAEA
VARASAEAEAGDTVLLAPAAASFDQYDNFEQRGEDFIAEVAKLQS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgtgaccggatttgaaggcgctacagttgcggtactggggcttgggcggtca
ggtctggccaccgcacgggcgctgcgcgaaggcggagcagagccgatctgctgggacgac
aatcccggcgcacgggcgcgggccgaggttgaggggctcacctgccgcgatctgctgaaa
tccggggcatttgatgacattgcctcattggttgtctcgccggggatcccgcatctttat
cccaaacccaacccggtgatccgcgcggcgatgatcgcgggcgtgccggtggacaatgac
atcgggctgttttttcgctcggttgcgacacggggctgggaacggttcgatcaggcgccg
cgcatcgtggcggtcacggggtccaacggcaaatccaccacggtggcgttgctgcatcat
attctgcaagaggccggacgtgagagccagctggcgggcaatatcggccggggtgtgctg
gacattgatccgccgggatccggcggcatcgtggtgctggagctgtcgagctatcagaca
gatctggcccgcgcgctgacgccggacgtggctgtgtttaccaatctcagccccgaccat
ctggaccggcacgcgggcatgggcggctatttcgcagccaagcgacggttgtttgccgaa
ggcggaccggatcgcgctatcattggcgtggatgaggatgaggggctgtatctggctggt
cagctctctgaggccgccagcgacgacagggtgatccgcatctcagccagtcggaaactg
accgggccgggctggcaggtcttcgcccgcaaggggttcctcagtgaataccgcaaaggg
cgacaggcggcgtcgattgatctgcgccagatgcaggggctgcccggcgcgcataaccat
cagaatgcctgtgcggcctatgctgcggcgcgtgctttgggcctcgcaccacgtctcatc
gaggacgcgctggccagctatccgggtctgccgcatcgcagtcagaccatcgcgacccac
gcaggcgtgcgctatgtcaacgacagcaaggccaccaatctggacagcgcggtgaaggcc
ttgagcgcctttgacaatatccgctggatttgcggcgggctggagaaagacggcgggctg
gaggccctgcgcggccagactggcaaggtgcgcaaagcctatgtgatcgggcgcgaggcg
gcgggctttgccatgcagctggacgtcgaggctgaggtctgcatcaccatggccgaggcc
gtcgcccgcgccagcgctgaggcggaggcgggcgatacggtcctgcttgcccctgcggcg
gcgagctttgaccaatacgacaacttcgaacagcgcggcgaggacttcatcgccgaggtg
gcaaagttgcagagctga
DBGET
integrated database retrieval system
