Phaeobacter piscinae: PhaeoP14_00977
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Entry
PhaeoP14_00977 CDS
T05105
Symbol
rhlE1
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
Organism
ppic
Phaeobacter piscinae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ATG39091
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Position
complement(1052757..1054304)
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AA seq
515 aa
AA seq
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MTKFSDLNLNPKVLKAIEEAGYESPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPM
ITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDTLI
DKGVDVLIATPGRLLDHFERGKLILSDVKVMVVDEADRMLDMGFIPDIERIFGLTPFTRQ
TLFFSATMAPEIERITNTFLSAPERVEVARQATTSENITQGVVLFKASRRDREGSEKRKL
LRHLIDQEGEKCTNAIIFCNRKTDVDIVAKSLKKYGYDAAPIHGDLDQSQRTKTLEGFRE
GSLRFLVASDVAARGLDVPSVSHVFNFDVPSHAEDYVHRIGRTGRAGRDGTAMMICVPKD
EKNLEDIERLVQNEIPRIENPLKKAKAEPKAKDSKDDASGEVPERKTRSRRSSSRSSAAK
DVNEAADAQQANDAATAEVDATAQEQKAPEQEKRASGRGKSAETKSSGQKSGQKGNQKSG
RGRGGNDRGNDRNVVGMGDHMPSFIALSFAERRAG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattttcagatctgaacctgaaccccaaagttctcaaagcgattgaggaagcg
ggttacgaatcccccactcccattcaggcaggggcaattccgcctgctttggaggggcgt
gatgtattgggaatcgcacagaccggcaccggcaagacggcatcgttcaccctgccgatg
atcaccctgctggcgcgcggtcgcgcccgggcgcgcatgccgcgcagcctggtgctctgc
cccacgcgcgagctggcagcccaggtggcggagaatttcgacacctacaccaaacacctg
aaactgacgaaggcgctgctgattggcggtgtttcgttcaaggagcaggacacgctgatc
gacaaaggggtggacgtgctgatcgccacgcctggtcgtcttctcgaccatttcgagcgt
ggcaaactgatcctctctgacgttaaggttatggtggtggacgaagccgaccggatgctc
gacatggggttcattcccgatatcgaacgcatcttcggcctgacgccttttacccgtcag
acactgttcttctccgccactatggcgcctgagattgagcggatcaccaatacgttcctc
tccgcgcctgagcgtgtggaagtggcccgtcaggcaacgacgtctgagaacatcacccaa
ggcgtggtgctgttcaaagcctcccgccgggaccgtgagggcagcgagaaacgcaagttg
ctgcgtcacctgattgatcaggaaggcgagaaatgcaccaatgcgatcatcttctgcaat
cgtaaaacggatgtggatatcgtcgccaaatcgctaaagaaatacggctatgacgcggcc
ccgatccacggtgacctggatcagagccagcgcaccaaaacgctggaaggattccgcgaa
ggctcgttgcggttcctcgtcgcatccgatgtggccgcacgcggccttgatgtgcccagc
gtcagccatgtgttcaacttcgacgtgccgagccatgcagaggactatgtccatcgcatc
ggtcggactggtcgtgcgggacgcgacggcaccgcgatgatgatctgcgtgcccaaggac
gagaagaacctcgaagacatcgaacgtctggtccagaacgagatcccgcgcatcgagaac
ccgctgaagaaagccaaggccgagccaaaggcgaaagacagcaaggacgatgcaagcggc
gaggtgcctgagcgcaagacccgcagtcgtcgctcctcttcccgcagctctgctgccaag
gatgtgaacgaggcggcagacgcccagcaggcaaacgacgctgcgaccgctgaggtcgat
gcaacagcacaggagcagaaggcccctgagcaggaaaagcgcgcgtctggccgtggcaaa
tctgccgagaccaaatcttccgggcagaaatccgggcagaagggcaaccagaaatccggt
cgtggccgtggcggcaacgaccgtggcaatgatcgcaatgtggttggcatgggcgaccac
atgcccagctttatcgccctcagctttgccgagcgccgcgccgggtaa
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