Phaeobacter piscinae: PhaeoP14_01002
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Entry
PhaeoP14_01002 CDS
T05105
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_01002 (radA)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PhaeoP14_01002 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
AAA_22
DnaB_C
AAA_16
AAA
AAA_30
SLFN-g3_helicase
nSTAND3
NTPase_1
AAA_24
Lon_C
KdpD
AAA_14
DUF815
MCM
NACHT
ATPase_2
AAA_5
ArsA_ATPase
DAP3
Motif
Other DBs
NCBI-ProteinID:
ATG39116
LinkDB
All DBs
Position
complement(1076158..1077522)
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AA seq
454 aa
AA seq
DB search
MAKTSYSCSACGASFSKWSGRCDGCGEWNSITEDKGLSKGGPASKSLGMRRGKTIPLSDL
ATEETPPPRTCCGVGELDRVLGGGLVPASAILVGGDPGIGKSTLLLQAAAQFARSGLKTI
YVSGEEASAQVRMRAQRLGLAEAPVKLAAETNLRDILTTLEAERPQLAIIDSIQTMWADH
VDSAPGSVSQVRAAAHELTTFAKTNGISIIMVGHVTKEGQIAGPRVVEHMVDTVLYFEGE
RGHQFRILRAVKNRFGPADEIGVFEMTGGGLSEVRNPSALFLSERGTPSPGSVVFSGIEG
TRPVLVEMQALVAPSPHSQPRRAVVGWDSSRLAMILAVLEARCGIPFAGLDVYLNVAGGM
KISEPAADLAVAAALLSAREDTALPADTVVFGEISLSGALRPAPQTENRLKEAQKLGFTA
AIAPSGGKSVAVPGLAVRQASDLAGFVGEYFGAG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaacatcctactcctgctctgcctgcggagcctccttttcaaaatggtccggg
cgctgcgatggctgcggcgagtggaattccatcaccgaagacaaaggcctgtccaagggc
ggccctgcgtcgaaatccctcggcatgcggcggggcaaaacgatcccgctgagcgatctg
gcaacagaggaaacaccgccgccgcgcacctgttgtggtgtgggcgagctggaccgggtt
ctgggtggtgggctggtgcctgcctctgccattctggtcggcggggatccggggatcggg
aaatcgacgctgttgttgcaggcggcagcgcagtttgcccgctcgggcctgaagacgatc
tatgtcagcggcgaggaagccagcgctcaggtgcggatgcgcgcgcagcggctggggttg
gcggaggcaccggtcaagctggcagcggaaaccaacctgcgcgatattctgaccacgctg
gaggcggagcggccgcagctggccatcatcgattccatccagaccatgtgggccgatcat
gtcgacagcgcgccggggtccgtgagccaggtgcgtgctgcggcgcatgagctgaccaca
ttcgccaaaaccaacggcatctccatcatcatggtcggccatgtcaccaaggaggggcag
attgctggtcctcgcgtggtcgaacatatggtcgatactgtgctgtattttgagggcgaa
cgcgggcatcagttccgcatcctgcgcgccgtcaagaaccgctttggccccgcagatgag
atcggcgtctttgagatgactggcggcgggttgagcgaggttcgcaatccctccgcactc
ttcctgtcagagcgcggcaccccctcgcccgggtcggtggtgttttccggtatcgaaggc
acccgcccggttctggtggagatgcaggcgcttgttgcaccctcgccgcattcgcagccg
cgtcgggccgtggtgggctgggactcctcgcgcctggcgatgatcctggccgttctggag
gcccgctgcggcatcccgtttgcggggcttgatgtctatcttaatgttgccggtgggatg
aaaatctcggaaccggcggcggatcttgcggtggcagcggcgctgctgagcgcgcgcgaa
gacaccgcgctgccggcagatacggtggtattcggagaaatatcgctctctggtgccctg
cgaccggcccctcagaccgaaaaccggttgaaagaagcgcaaaaacttggtttcaccgca
gccatagctccaagtggtggcaaatccgtcgcggtccccggacttgcggtgcgacaggcc
tctgatctcgccggttttgttggcgagtattttggggctggctaa
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