Phaeobacter piscinae: PhaeoP14_01015
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Entry
PhaeoP14_01015 CDS
T05105
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00730
Thiamine metabolism
ppic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PhaeoP14_01015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppic03009
]
PhaeoP14_01015
Enzymes [BR:
ppic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
PhaeoP14_01015
Ribosome biogenesis [BR:
ppic03009
]
Prokaryotic type
GTPases
PhaeoP14_01015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
ABC_tran
MMR_HSR1
GTP_EFTU
AAA_33
AAA_25
AAA_18
TsaE
AAA_28
AAA_29
IstB_IS21
AAA_22
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ATG39129
LinkDB
All DBs
Position
complement(1092183..1093274)
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AA seq
363 aa
AA seq
DB search
MTRDYSQFLSTPAPEDTADSTRPLSALEHLGWQGVFSQQTDLDEMASHPPVRITEVNRNG
LRAMGDGIDMVIPPGPEATVGDWLMLDSELPTHSRVLERKSLIRRRAPGKDRKVQLIAAN
IDTMFVVTSCNADFNVARLERFIAMAFDAEVTPVIVLTKIDLCEDPAEYISQAKSISDLV
EVVPLNAKSAAAREALAPWVRAGQTIAFLGTSGVGKSTLTKALGEDLDIATQGIREDDAR
GRHTTTRRQLYFLDNGCGVLDTPGMRELQLTDAASGVGDVFADLEELATQCRFRNCAHEG
EPGCAVQAGIAAGEVDASRLDRWRKLAAEEAFNSASLAQKRAKDKSFGKMVKTAKTIKKR
SRK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggactattcccaattcctgagcacccctgcgcctgaagacaccgccgacagc
acgcgccctttgagcgcgctggagcatcttggctggcagggggtcttctcccagcagacc
gatctggacgaaatggcgagccacccgcccgtgcgcatcaccgaagtgaaccgcaacggg
ctgcgggccatgggcgacggcatcgacatggtgatcccccctggccccgaggcgactgtg
ggggattggctgatgctggactctgagctgccaacacacagccgggtgctggagcgtaaa
agcctgatccgccgccgcgcaccgggcaaggatcgcaaggtccagctgatcgccgccaat
atcgacacgatgtttgtggtcacctcctgcaatgcggatttcaatgtcgcgcggctggag
cggtttattgccatggcgtttgatgctgaggtgacgccggtgatcgtgctgacaaaaatc
gacctttgcgaggatccggcggagtatattagccaggccaagagcatttccgatctggtg
gaggtggtgccgctgaacgccaagagcgcggccgcgcgcgaggcgctggcgccctgggtg
cgggccgggcagaccattgccttcctcggcacctcgggcgttggcaaatcgacgctgacc
aaggcgcttggcgaggatctggatatcgcaacgcagggcatccgcgaggatgacgcgcgc
ggacgccacaccaccacccggcggcagctctatttcctcgacaacggctgcggcgtgctg
gacacgccggggatgcgggaattgcagctgaccgatgcggccagcggtgtcggcgatgtc
tttgccgatcttgaagagttggcgacacagtgccgcttccgcaattgcgcccatgaaggg
gagccgggctgcgcggtgcaggcgggcattgccgccggtgaggttgacgccagccggttg
gaccgctggcgtaaactggccgcggaagaagccttcaattccgcctctctggcgcaaaaa
cgcgccaaggacaaaagctttggcaagatggtgaaaacggcgaaaaccatcaagaagcgc
agccggaaatag
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