Phaeobacter piscinae: PhaeoP14_01095
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Entry
PhaeoP14_01095 CDS
T05105
Name
(GenBank) putative proline dehydrogenase transcriptional activator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppic03000
]
PhaeoP14_01095
03036 Chromosome and associated proteins [BR:
ppic03036
]
PhaeoP14_01095
Transcription factors [BR:
ppic03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PhaeoP14_01095
Chromosome and associated proteins [BR:
ppic03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PhaeoP14_01095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR_2
MarR
HTH_20
HTH_Crp_2
DUF7343
HTH_5
NirdL-like_HTH
DprA_WH
VMAP-M2
HTH_CodY
HTH_27
HTH_10
GntR
HTH_Tnp_ISL3
HTH_36
TrmB
HxlR
HTH_26
LexA_DNA_bind
HTH_47
Rrf2
HTH_7
HTH_53
Motif
Other DBs
NCBI-ProteinID:
ATG39208
LinkDB
All DBs
Position
1174304..1174777
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AA seq
157 aa
AA seq
DB search
MQMDFPGMDRFDQAILAALGEDGRMSIADLARRIGLSKTPTQARLRRLEAEGIITGYRAL
IDPIRLGLDHVAFVEVKLTDTREAALAKFNAALARVPEIEQAHLMASHFDYLLKVRTRSM
SAYRAVLGEKISALPHVASTSTYVAMQAVIEDSAVLP
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggactttccgggaatggatcggttcgatcaggcgattctggccgccttgggc
gaggacgggcgcatgtcgatcgcggatctggcgcgccgcattgggctgtcgaagacaccg
acacaggcgcggctgcggcggctggaggctgaggggatcatcaccggttatcgggcattg
atcgatccgatccggctggggctggatcacgtggcgttcgtcgaagtgaaactgacggac
acccgcgaggcagccctggcgaaattcaacgcggcccttgcgcgggtgcccgagatcgaa
caggcgcatctgatggcctcacattttgactatcttctgaaggtgcggacgcgatccatg
tcggcctatcgggcggtgctgggcgagaagatttctgcgttgccgcatgtggcgtcgacc
tccacctatgtggcgatgcaggcagtgattgaggacagcgctgtgctgccgtga
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integrated database retrieval system
