Phaeobacter piscinae: PhaeoP14_01107
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Entry
PhaeoP14_01107 CDS
T05105
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase GlyA
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00260
Glycine, serine and threonine metabolism
ppic00460
Cyanoamino acid metabolism
ppic00630
Glyoxylate and dicarboxylate metabolism
ppic00670
One carbon pool by folate
ppic00680
Methane metabolism
ppic01100
Metabolic pathways
ppic01110
Biosynthesis of secondary metabolites
ppic01120
Microbial metabolism in diverse environments
ppic01200
Carbon metabolism
ppic01230
Biosynthesis of amino acids
ppic01240
Biosynthesis of cofactors
ppic04981
Folate transport and metabolism
Module
ppic_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PhaeoP14_01107 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PhaeoP14_01107 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PhaeoP14_01107 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PhaeoP14_01107 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PhaeoP14_01107 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PhaeoP14_01107 (glyA)
Enzymes [BR:
ppic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PhaeoP14_01107 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ATG39219
LinkDB
All DBs
Position
complement(1184709..1186007)
Genome browser
AA seq
432 aa
AA seq
DB search
MTETTSRDPGFFTQSLAERDPELFGSVTDELGRQRDEIELIASENIVSAAVMEAQGTVLT
NKYAEGYPGRRYYGGCQYVDVAENLAIDRAKQLFGCEFANVQPNSGSQANQGVFQALIKP
GDTILGMDLASGGHLTHGARPNQSGKWFNAVHYGVREDDCLIDYDQVEALAVEHQPKLII
AGGSAIPRVIDFARFREIADKVGAYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTL
RGPRGGMILTNDADIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKDYQKQVRA
NAVALADQLIKGGLDIVTGGTDTHVMLVDLRPKGVTGNIVDKALGRAHITTNKNGIPFDP
EKPTVTSGIRLGTPAGTTRGFGEAEFREIADLIIEVVDGLAANGEDGNAAVEASVREKVA
ALCARFPLYPNH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaccacttcccgcgaccccggttttttcacccaatccctcgccgagcgcgat
ccggagctgttcggctcagtcacggatgaacttggtcgtcagcgcgacgagatcgaactg
atcgcgtcggaaaacatcgtctccgccgccgtgatggaggcccagggcactgtcctgacc
aacaaatacgccgagggctacccgggtcgtcgctactatggcggctgccaatacgttgat
gttgcagagaaccttgccatcgaccgcgccaagcagctgtttgggtgtgaattcgcaaac
gtgcagcccaactccggctcacaggccaaccagggtgtgttccaggcgttgatcaaaccc
ggcgacaccatccttggtatggatctggcctccggcggtcacctcactcacggtgcgcgc
cccaaccagtccggcaaatggttcaacgcggttcactacggtgtgcgcgaagacgactgc
ctgattgactacgaccaggttgaggccctcgcagttgagcatcagcccaagctgatcatc
gccggtggttccgccattccgcgcgtcatcgactttgcccgcttccgcgaaatcgctgat
aaggttggcgcctacctgcatgtcgacatggcgcatttcgccggtctggtcgccgcgggt
gagcacccctcccccttcccgcatgcccatgttgccaccaccaccacgcataaaaccctg
cgcggcccgcgcggtggcatgatcctgaccaacgatgccgatatcgcaaagaaggtgaac
tccgcgatcttccccggtatccagggtggcccgctgatgcatgtgatcgccgccaaggca
gtggcctttggcgaggcgctgcgtcctgagttcaaagactatcagaagcaggtgcgcgcc
aatgccgtggccctcgcggatcagctgatcaaaggcggtctggatatcgtcaccggcggc
accgacacccatgtcatgctggtcgacctgcgccccaaaggcgtgaccggtaatatcgtg
gacaaggctctgggccgcgcccatatcaccaccaacaagaacggcatcccgttcgacccg
gaaaagccgactgtgacctcgggcatccgccttggcaccccggcgggcaccacccgtggc
tttggagaggcagaattccgcgagatcgcggatctgatcatcgaagttgtcgacggtctg
gccgccaatggcgaagatggcaacgctgcggtcgaggcttcggtacgtgagaaagtggcc
gccctctgcgcccgtttcccgctctacccgaaccactaa
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