Phaeobacter piscinae: PhaeoP14_01294
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Entry
PhaeoP14_01294 CDS
T05105
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase PhrB
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_01294 (phrB)
Enzymes [BR:
ppic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PhaeoP14_01294 (phrB)
DNA repair and recombination proteins [BR:
ppic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PhaeoP14_01294 (phrB)
Prokaryotic type
PhaeoP14_01294 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATG39401
LinkDB
All DBs
Position
1373660..1375099
Genome browser
AA seq
479 aa
AA seq
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MTDDKPSNAPIIWWVRRDLRLADNPALAAAVAADVPVIPVFILDALDEDLGAAPRFRLGL
GLAHLAKELERRGARLILRRGSAQEVLTQLITDTGAGAVHWTRAYDPQAIARDTDIKDQL
KGQGIAAKSFGGHLLFEPWTVETKTGGMYRVYSPYWKAVRDRDVDGLIAAPSRIPAPAHW
PASDDLDSWQMAAAMRRGADVVAQYCRVGEDAAQERLAEFLDSRVADYKQDRDFPAMDAT
SGLSENLAWGEISPRRMWHHGLEARRAGKSGAEHFLKEIVWREFAYHLMFHTPHILTRNW
RPEWEHFNWSERDDDKVDAWRRGQTGYNFVDAAMRELYVTGKMHNRARMIVASFLTKHML
THWRIGQQWFEECLVDWDPASNAMGWQWVAGSGPDASPFFRIFNPDGQLEKFDAKGRYQS
AWIAEGQANPPQTALDFYRATPLSWQLSPKDKRAEPFLDLKEGRARALEVYGQRELPDD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgacaaaccgagcaacgccccgatcatctggtgggtgcggcgcgacctgcgt
cttgccgataacccggcgctggcggcggctgtcgctgcggatgttccggttatccctgtc
tttatccttgatgcgctggatgaggacctgggcgccgcgccaaggttccggttggggctg
gggctggcgcatctggccaaggagctggagcggcgcggcgcgcggctgatcctgcgccgc
gggtcagcacaggaggtgctgacgcagctgatcacggacaccggtgcgggcgcagttcac
tggacccgcgcctatgacccgcaggccatcgcccgcgacaccgacatcaaggatcagctg
aaggggcagggaattgcggcgaaatcctttggcggccatctgctgtttgagccctggacg
gtcgagaccaaaaccggcggcatgtaccgggtctattcgccctattggaaggcggtgcgc
gaccgcgacgttgacgggctgatcgccgccccctcacggatcccggcgccggcgcattgg
ccggcctcagatgatctggacagctggcagatggctgccgcgatgcggcggggcgcagat
gtggtggcgcaatactgccgcgtcggcgaagatgcagcgcaggagcggctggcagagttc
ctcgacagccgcgtcgccgactacaaacaggaccgcgattttcccgcaatggatgccacc
tcgggtctgtctgagaacctcgcttggggggagatcagtccgcgccgcatgtggcatcac
gggctggaggcgcgccgggccggcaaatccggcgctgagcatttcctcaaggaaatcgtc
tggcgcgaatttgcctatcacctgatgttccacaccccccatattctgactcgcaactgg
cgcccggaatgggagcatttcaactggtcggagcgtgacgatgacaaggtcgacgcctgg
cggcgcggccagacagggtataatttcgtcgatgccgccatgcgagagctttacgtgacc
ggcaagatgcacaaccgcgcccggatgatcgtggccagctttctgaccaaacatatgctc
acccattggcgcattggccagcagtggtttgaggagtgtctggtggactgggacccggcc
tccaacgccatgggttggcaatgggtggcaggctccggccctgatgcctcgccgttcttt
cggattttcaaccccgatggccagctggagaaattcgacgccaaaggccgctaccagtcc
gcctggatcgccgaagggcaggccaatccgccgcagaccgcgctggatttctaccgcgcc
acacccctgtcctggcagctgtcgccaaaggacaaacgcgctgagccgttccttgacctg
aaggagggccgcgcccgcgcgctggaggtctacggccagcgggaactgcctgacgactga
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