Phaeobacter piscinae: PhaeoP14_01418
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Entry
PhaeoP14_01418 CDS
T05105
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit GyrA
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppic03032
]
PhaeoP14_01418 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_01418 (gyrA)
Enzymes [BR:
ppic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PhaeoP14_01418 (gyrA)
DNA replication proteins [BR:
ppic03032
]
Prokaryotic type
DNA Topoisomerases
PhaeoP14_01418 (gyrA)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PhaeoP14_01418 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5791
HIN
Motif
Other DBs
NCBI-ProteinID:
ATG39524
LinkDB
All DBs
Position
complement(1509116..1511842)
Genome browser
AA seq
908 aa
AA seq
DB search
MDENKPERPQYDGPTVSIESEMRTSYLDYAMSVIVSRAIPDLRDGLKPVHRRILYAMHEV
GNSHDKPYRKSARPVGDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDGQGNFGSMDGD
NPAAMRYTEVRMDKPAASILADIEKDTVDFQDNYDGKDREPTVLPARFPNMLVNGAGGIA
VGMATNIPPHNLGEVIDATLALIEDPDLTSEQLIDFVPGPDFPTGGVMLGRSGARKAYLE
GRGSVVIRAKTRVEEIRKDRYAIVVEEIPYQVNKAAMIEKIAEQVREKKIEGVSHVQDES
DRNGVRVVVELKRDATAEVVLNQLYRFSPMQTHFGCNMLALNGGRPEQLTLRRFLTSFLD
FREDVIARRTAYDLRKARERSHILCGLAVAVSNVDEVVATIRASADAAEARQKLMTRRWP
AVDIAPYIRLIDDPTHTMNDDGTYNLSEIQARAILELRLQRLTQIGVKEVTDELEELAGK
IKEYLEILSSRERILGIISDELREVRDNFAVPRRTQIVDWSGDMEDEDLIEREDMVVTIT
SGGYIKRTPLADFRAQKRGGKGLSGMQTKEEDVVTNLFVANTHTQLLFFTTDGMVYKLKT
WRLPQGGRTSKGKAIVNILPIPPGVSIAAIMPVDVPDDEWENLQVVFATSGGDVRRNRLS
DFTNVRRNGKIAMKLPEDGSVRLVNARICSEDDDVMLVTNSGRAIRFRSTDVRVFNSRES
TGVRGIRLVSDGDEVVSMSVIRHFSAEPWERNAFIKRFRSEFGGEVAEDENGEETEGSLS
EERYQEMLAANDLLVTINRSGVGNLTSAHDYRVSGRGGQGVGAMKGGAIVATFPVELEDQ
IMLATSKGQSIRCPVNGISFRSRSAGGVRVFNTAKGEEVVSVAWIAERDDEDAEVPTSEG
ASEAAEAT
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaacaaacctgaacggccccagtatgacggcccaacggtgtccatcgaatcc
gagatgcgcacatcgtatctcgactatgcgatgtcggttattgtcagccgcgccattcct
gacctgcgtgacgggttgaaaccggttcatcgccggattctctacgccatgcatgaggtc
ggcaattcgcatgacaaaccctaccgcaaatcggcgcgcccggttggcgatgtcatgggt
aaataccacccccatggcgactccgcgatttatgacgccttggtgcggatggcgcaggat
ttctccatgtcactgccgcttctcgacggtcagggcaactttgggtccatggatggcgat
aacccagccgccatgcgctataccgaagtgcggatggacaaacccgccgcctcaatcctg
gctgacattgaaaaagacacggtcgattttcaggacaactacgatggcaaggaccgtgaa
ccgacggttctgcccgcgcggttccccaacatgctggtcaatggcgctggtggtatcgcg
gttggtatggccaccaatatcccgccccacaacctgggcgaagtgattgatgccacgctc
gcgctgatcgaagacccggatctgaccagtgaacagctgatcgactttgttcccggcccg
gactttccgaccggcggcgtgatgctgggtcggtccggcgcgcgcaaggcctatctggaa
gggcgcggcagcgtcgtcattcgcgccaagacccgcgttgaggaaatccgcaaggaccgc
tacgccatcgtggtcgaggagatcccgtatcaggtcaacaaggcggcgatgatcgaaaag
atcgccgaacaggtgcgcgagaaaaagatcgagggtgtcagccacgttcaggatgaatcc
gatcgcaacggcgtgcgggttgttgtcgaactgaaacgcgatgccacggctgaggtggtg
ctgaaccagctctatcgtttctcgcccatgcagacgcactttggctgcaacatgctggct
ctgaatggtggtcgccctgaacagctgaccctgcgccggttcctgacgtctttccttgat
ttccgcgaagacgtgattgcgcggcgcaccgcctatgatctgcgcaaggcgcgggaacgc
agccatattctgtgcggtttggccgtcgcggtttctaatgtagacgaagtggtcgcaacc
atccgcgcctctgcggatgcagccgaagcgcggcagaagctgatgacccggcgctggcct
gcggtcgacatcgcaccttatatccgtctgattgacgatccgacccacaccatgaatgac
gacggcacctataatctctccgagattcaggcccgcgccattctggaactgcgtttgcaa
cgtctcacccagattggtgtcaaagaagtcacggatgagctggaagaactggcaggcaag
atcaaggaataccttgagatcctgtcctcgcgtgagcgtattctgggcatcatctcggac
gagctgcgcgaagtacgtgataatttcgccgttccccgtcgcacccagatcgtcgactgg
tccggcgacatggaagacgaggatttgatcgagcgcgaagacatggtcgtgacgatcacc
agcggcggctatatcaagcggacccctctggccgacttccgggcgcagaagcgtggcggc
aaagggctgtcgggtatgcagaccaaggaagaggatgttgtcaccaacctctttgtggcc
aatacccatacccagctgttgttcttcaccaccgatggcatggtttacaagctgaagacc
tggcgcctgccgcaaggtggccgcacgtcgaagggtaaggcgattgtcaacattctgccg
atcccgccgggcgtctccatcgcggcgatcatgccggtcgatgtgccagacgacgaatgg
gaaaacctacaggtggtctttgccacctcgggcggggacgtgcgtcgcaaccgcctgtcg
gatttcaccaatgtgcgccgcaacggcaaaatcgcgatgaagctgccggaggatggctcg
gtcaggctggttaacgcgcgcatctgctccgaggatgatgacgtgatgctggtgaccaat
tccgggcgggcaatccgcttccgctccaccgacgtccgcgtcttcaactcccgtgaatcg
accggggtgcgtgggatccgactggtaagcgatggggatgaggtcgtctcgatgtcggtg
atccgccacttcagcgcagaaccctgggagcgcaatgccttcattaaacggttccgctcc
gagtttggcggcgaggttgccgaagacgaaaatggtgaagaaaccgaaggttcactctcc
gaggagcgctatcaggaaatgctggcggccaatgatctcttggtgaccatcaaccgctct
ggtgtgggcaatctgacctccgcacatgactaccgtgtcagcgggcgtggcggacagggt
gttggtgccatgaaaggcggcgccatcgtcgcgaccttcccggtcgagcttgaggatcag
atcatgctggcaacgtccaaaggccagtcgatccgctgtccggtcaacggcatctcgttc
cgttcccgcagcgccggtggtgtgcgcgtgttcaacacggccaagggcgaagaggtcgtc
tcggttgcctggatcgcggaacgcgacgacgaagatgcagaggttcccacgtctgagggt
gccagcgaagctgctgaggcaacctga
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