Phaeobacter piscinae: PhaeoP14_01477
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Entry
PhaeoP14_01477 CDS
T05105
Name
(GenBank) putative glycine cleavage system transcriptional activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppic03000
]
PhaeoP14_01477
Transcription factors [BR:
ppic03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PhaeoP14_01477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR_2
HTH_5
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ATG39581
LinkDB
All DBs
Position
1572532..1573443
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AA seq
303 aa
AA seq
DB search
MATPRRFLPSIAALRALEALDRLGSASAAADELALTQGAVSRQLQALERQLGVDLVRRDQ
KRLTLSPEAQTYAADIRQALNQIAQSTLRVQAAPLAGSLNLAILPAFGMRWLMPRLPEFA
RRHPDVTINMSTRLEPFNFVSEGFDAAIHFGTADWPGTQALLLKHEQMLPVCAPDLLAGG
EVRTPSDIAALPLLHIQTRPQAWQHWFESHDIALQDGLSGTMYDQFATITQAALHGLGVA
LMPDYLVEQDLATGRLVALHATATESPGAYYLVWPEARSKDPALIKFRSWLAGQAQPEDP
LPR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccaccccgagacgcttcctcccttcaattgcggcgctgcgcgcgctggaagcgctg
gaccgtttgggcagcgcctcggccgcggcggatgagttggcgctgacgcagggtgcagtg
agccgtcagttgcaggcgctggagcgtcaattgggcgtggatctggtgcgccgagaccag
aagcggctgacgctgtcaccggaggcgcagacctacgctgctgatattcgtcaggcgctg
aaccagatcgcccagtcgacgctgcgcgtacaggcagcgcccttggctggcagtcttaat
ctggcgattctgcccgcttttgggatgcgctggttgatgccgcggctaccggaatttgca
cggcggcatccggatgtgacgatcaatatgtccacgcggctggaaccgttcaacttcgtc
agcgaaggctttgatgctgcgatacattttgggactgcggactggcccggaacccaggcg
ctgctgctgaaacatgaacagatgctgccagtctgtgcgcccgacctgctggccgggggg
gaggtccgtaccccgagtgatatcgccgccctgcccctgttgcatatccagactcgccct
caggcctggcaacactggttcgagagccatgatatcgcgttgcaggacggtttgtccggc
accatgtatgaccaattcgcaaccattacacaggctgcgctgcatgggcttggcgtggcc
ttgatgccggattatctggtggagcaggatcttgcgacagggcggcttgtggcgcttcac
gccaccgctaccgaaagcccgggcgcttattacctggtctggcccgaggcccggtccaag
gaccctgccctgatcaagttccgcagctggctggcgggtcaggcgcagcccgaagatccg
ctgccaaggtag
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