Phaeobacter piscinae: PhaeoP14_01923
Help
Entry
PhaeoP14_01923 CDS
T05105
Name
(GenBank) transcriptional regulator, GntR fmaily
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppic03000
]
PhaeoP14_01923
Transcription factors [BR:
ppic03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PhaeoP14_01923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
MarR_2
TrmB
HTH_20
Rrf2
HTH_CodY
HTH_Crp_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ATG40014
LinkDB
All DBs
Position
2047296..2048006
Genome browser
AA seq
236 aa
AA seq
DB search
MDSPQTTLRKIDKAPQTLRDIVQDRMREAIIDGHFAPGERLVERPLCDQLGVSRTVVRET
IRYLEAEGLVEIIPNRGPVVARLSWDQARQIYDVRRQLEGSAAAACAMQQRPAFAGKLTR
ALDTVEATMADTEWSNLLRATTDFYQLIFMEAGHSIAWDIVQRLNGRISRLRALTIAAKD
RETSGMSHMTAIHDAILSRDPDRARKAVEAHIADAAQTAQRFLKDPAPTAKETPNG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggacagccctcagacaacgctccgaaaaatcgacaaggcgccgcaaactctgcgagat
attgtgcaggaccggatgcgcgaggccatcatcgacggacattttgcgcccggtgaacgg
ttggtggagcgcccgctctgcgatcagctcggcgtcagccggaccgtcgtgcgcgaaacg
attcgctatcttgaggcagaggggctggtcgagatcatccccaatcgcggaccggtcgtt
gcgcggctctcttgggatcaggcccgccagatctacgacgtgcgccgccagctggaaggg
tccgctgctgccgcctgcgccatgcaacaaagaccggcattcgctggcaagctgacccgc
gcgcttgatacggtggaggccacaatggccgataccgagtggagcaacctgctgcgcgca
acgactgatttttatcagcttatctttatggaggcgggccacagcattgcctgggacatc
gtgcagcgcctgaatgggcggatcagccggttgcgggccttgaccatcgcggcaaaggac
cgcgaaacctcagggatgagccatatgaccgcgatccatgatgccattctcagccgcgac
ccggacagggcgcgcaaagcggttgaagcgcatattgccgacgcggcccaaactgcgcag
cggttcctgaaagaccctgcgccaacagctaaagagacgccaaatggctaa
DBGET
integrated database retrieval system
