Phaeobacter piscinae: PhaeoP14_02146
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Entry
PhaeoP14_02146 CDS
T05105
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PhaeoP14_02146 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_02146 (xseA)
Enzymes [BR:
ppic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PhaeoP14_02146 (xseA)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PhaeoP14_02146 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
ATG40225
LinkDB
All DBs
Position
complement(2264712..2266277)
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AA seq
521 aa
AA seq
DB search
MSDLFDDPTPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVKGEVGRVFKARSGHLYY
DIKDDRSVLACTTWKGQIASLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGA
LMALLEKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVL
VWPVAVQGANCAPEVARAIEGFNQLTPGGAMPRPDLIIVARGGGSIEDLWGFNEEIVARA
VANSQIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWTENQGARLVRS
AGQAVQQRRQRLNDLARALPKPDTLLETPRQRLDRVSERLPDALIRGVERRRLRLSEAAA
ALRPSTLRQLVTARQDRLRNLSSRLTLRPIQQDLTRQHDRIGQLAQRLETVQTQRLDRHR
QRLEATGRQLEILSYKATLDRGYAVVRSDDGVITRAAEAAIQPRLRIEFADAEIDVTPAQ
AAAGDGAISPAKTPSAPKSEGSKAGKRQSDKAPPDDQGSLF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacctgtttgatgatccaaccccatccgaccggcccgggcagaatgcccccgaa
ttcaccgtctcggaaatctcaggtgaggtgaagcgcacgctggagggcaccttcgggcgc
atccgggtgaagggcgaggtgggccgcgtgttcaaggcgcgctccgggcatctttattac
gacatcaaggatgaccgctctgtgctggcctgcaccacgtggaaggggcagatcgccagc
ctctccgtggtgccggaagaggggctggaggtggttgtcaccggccggctgacagcgttc
ggcgggcagtcgaaatacaatatgaacgtcgatgaggtcgcggttgccgggcagggcgcg
ctgatggcgctcctggaaaagcgcaagaaacagcttgaggcggaaggcctgtttgcgccg
gagcgtaagaagccgctgccgtatctgccacaaatcatcggggtggtgacctcaccctcg
ggggctgtgatccgcgatatcctgcaccggctgcgcgaccggttcccgcgcaaggtgctg
gtctggccggttgcggtgcagggcgccaactgcgcgccggaggtggcccgcgccattgaa
ggcttcaaccagctgacaccggggggcgcgatgccacgaccggatttgatcatcgtggcc
cgtggcggggggtcgatcgaagacctgtggggctttaacgaggaaattgtcgcccgggct
gtcgcgaacagtcagatcccgctgatctcagccgtgggacatgagacagataccacgctg
attgattttgtgtcggaccgtcgcgcgccaaccccgacggcggcagcagaactggcggtc
ccggtgcggttggaactgctgggctggaccgagaatcagggggcgcgcttggtgcgctct
gccgggcaggcggtgcagcagcgacggcagcggctgaacgatctcgcgcgggctctgcca
aagcccgatacgctgttggaaacgccgcgccaacggttggaccgggtgtctgaacggctg
cccgatgcgctaatccggggggtggagcgtcgccgtctgcggctgagcgaggcggcggct
gcgctgcggcccagcacgctgcgtcagttggtcaccgcccgtcaggatcggttgcgcaac
ctctcgtcacggctgacgctgcgcccgatccagcaggatcttacccgccagcacgatcgt
atcggccagctggcgcagcggcttgaaaccgtgcagacacagcggctggaccggcaccgg
caacggctggaggcaacgggtcgacagctggagatcctcagctacaaggctacgcttgat
cgtggctatgccgtggtgcgcagtgatgacggcgtcatcacccgcgcggcagaggccgcc
atccagccacggttgcggatcgaatttgccgatgcagagattgacgtgacgcctgcgcaa
gcagctgccggtgacggggcgatatcgccagcaaagacacccagcgcgcccaaatcagaa
gggtccaaagcagggaagcgccaaagcgacaaggcgccgccggatgatcaggggtcgctg
ttctga
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