Phaeobacter piscinae: PhaeoP14_02242
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Entry
PhaeoP14_02242 CDS
T05105
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00220
Arginine biosynthesis
ppic00240
Pyrimidine metabolism
ppic00250
Alanine, aspartate and glutamate metabolism
ppic01100
Metabolic pathways
ppic01110
Biosynthesis of secondary metabolites
ppic01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PhaeoP14_02242 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PhaeoP14_02242 (carB)
00220 Arginine biosynthesis
PhaeoP14_02242 (carB)
Enzymes [BR:
ppic01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PhaeoP14_02242 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
ATP-grasp_4
Dala_Dala_lig_C
ATPgrasp_Ter
CoA_binding_2
ATP-grasp_5
RimK
Motif
Other DBs
NCBI-ProteinID:
ATG40321
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All DBs
Position
2364556..2367915
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AA seq
1119 aa
AA seq
DB search
MPKRTDIQSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL
ADATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTALALEEMGVLAKFDVEMIGAKR
EAIEMAEDRKLFREAMDRLGLENPRATIITAPKKDNGSADLDAGVQMALDELEDIGLPAI
IRPAFTLGGTGGGVAYNREDYIHFCRSGMDASPVNQILVDESLLGWKEYEMEVVRDTADN
AIIVCSIENIDPMGVHTGDSITVAPALTLTDKEYQMMRSASIAVLREIGVETGGSNVQWA
VNPADGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELDNDITGVTPASF
EPTIDYVVTKIPRFAFEKFAGSEPYLTTAMKSVGETMAIGRTIHESLQKALASMETGLTG
FDEVAIPGTEDETDGKAAVIKAISQQTPDRMRTIAQAMRHGLSDDDIHAVTKFDPWFLAR
IREIVDTEAKIRAEGLPQDEHGLRAIKMLGFTDARLAKLTDQSESDVRRARRNAGVTAVF
KRIDTCAAEFEAQTPYMYSTYEAPAFGDVECEARPSDKKKVVILGGGPNRIGQGIEFDYC
CCHACFALTDAGYETIMINCNPETVSTDYDTSDRLYFEPLTFEHVMEILTKEQENGTLHG
VIVQFGGQTPLKLANALEEEGIPILGTSPDAIDLAEDRERFQALVNQLGLKQPRNGIAST
DAQAIEIAEEIGFPLVIRPSYVLGGRAMEIVRDMDQLKRYIAEAVVVSGDSPVLLDSYLS
GAVELDVDAICDGTDVHVAGIMQHIEEAGVHSGDSACSLPPYSLSKEVIAEVKTQTNALA
KALNVVGLMNIQFAVKPDADGNEVIYLIEVNPRASRTVPFVAKSTDSAIASIAARVMAGE
PLSNFPKRAPYEPDAGYDVNVPMADPMTLADPDMPWFSVKEAVLPFARFPGVDTLLGPEM
RSTGEVMGWDRSFARAFLKAQMGAGMVLPSEGRAFISIKDADKGTLMLDAAKILVEQGFT
LVATRGTQSWLDGHGVPCELVNKVYEGRPHVVDMLKDGNVQLLMNTTEGAQAVQDSKDMR
SVALYDKIPYFTTAAGANAAARAIKAQAEGDVEVKSLQG
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaagaaccgatatccaatcgatcatgatcattggtgcggggccgatcatcatt
ggccaagcctgtgagtttgactactcaggcgcgcaggcctgcaaggcacttcgcgaagag
ggctaccgggtcattctggtgaattcgaacccggcgacgatcatgactgatccgggtctg
gcggatgccacctacatcgagccgattacgcccgaagtggttgccaaaatcatcgaaaaa
gaacgccccgacgcactgctgccgacgatgggtgggcagaccggtctgaacaccgcgctg
gcgctggaagagatgggcgtgctggcgaaattcgacgttgagatgatcggcgccaagcgc
gaagccattgaaatggcagaagaccgcaagctgttccgcgaggcgatggatcggcttggg
ctggaaaacccccgcgccacaatcatcacagcgccgaagaaagacaacggcagtgccgat
ctggacgccggtgttcagatggctctggatgagctggaagacatcggcctgcccgcaatc
atccgcccggccttcacccttggcgggaccggcggtggggtcgcctataatcgcgaagat
tacatccatttctgccgctccggcatggatgcctctccggtcaatcagatcctcgtcgat
gagagcctgctgggttggaaagaatacgagatggaggtggtgcgcgacaccgccgacaac
gcgattatcgtctgctcgatcgagaatatcgacccgatgggcgtccacacaggtgattcg
atcaccgtggccccggcgctgacgctgaccgacaaagaataccagatgatgcgctctgcc
tcgattgcagtactgcgcgagattggcgtggaaaccggcggatccaacgtgcaatgggcc
gtgaacccagccgatggccgcatggtggtgatcgagatgaacccgcgcgtgtcgcgctcc
tcggcgctggcctccaaggcgaccggcttcccgattgccaagatcgccgccaaactggcg
gtcggcttcactttggatgagctggacaatgacatcaccggcgtgaccccggcatcgttt
gagccgaccatcgactatgtcgtcaccaagatcccgcgctttgcgtttgagaaatttgca
ggctcagagccctatctgaccaccgcgatgaaatccgtgggcgagaccatggccattggc
cgtaccatccatgagagcctgcaaaaggcgctggcctcgatggaaaccgggctcacaggt
tttgatgaggtggccatccccggcaccgaggatgagaccgatggcaaagccgcggtgatc
aaggcgatcagccagcagaccccggaccggatgcgcaccatcgcccaggcgatgcgccac
ggcttgtccgatgatgacatccacgcggtcaccaaattcgacccctggttcctggcccgg
atccgcgaaatcgttgacaccgaagccaagatccgcgccgaaggcctgccccaggacgag
catggtctgcgcgcgatcaagatgctgggcttcaccgacgcgcgtctggccaaactgacc
gaccagagtgagagtgacgtgcgccgcgcccgccgcaacgctggcgtcaccgctgtcttc
aagcggatcgacacctgtgccgccgaattcgaggcccagactccctacatgtattccacc
tatgaggctccggcctttggcgatgtggaatgcgaggcgcgcccctcggacaagaaaaaa
gtcgtcatcctcggcggtggccccaaccggattggtcaggggatcgagtttgactactgc
tgctgccacgcctgttttgcgctgaccgatgcgggctatgagaccatcatgatcaactgc
aacccggagaccgtgtcgaccgactatgacacctcagaccggctgtattttgaaccgctg
acgttcgaacatgtgatggagatcctgaccaaggaacaggaaaacggcaccctgcatggc
gtcatcgtccagttcggcggccagacaccgctgaagctggccaatgcgctggaagaggaa
ggcattccgatcctcggcacctcacctgacgccattgacctggccgaggaccgcgagcgg
ttccaggccctggtcaatcagctgggtcttaagcagccgcgtaacggcattgcatccacc
gacgcacaggcgattgagatcgcagaagaaatcggctttccgctggtgatacgcccgtcc
tatgttctggggggccgcgcgatggaaatcgtgcgcgatatggaccagctgaagcgctac
atcgccgaggcggttgtggtctccggggacagcccggttctgctcgacagctatctctcc
ggtgcggtggaactggacgttgatgcaatctgcgacggcacggatgtgcatgtggccggc
atcatgcaacatattgaggaagcaggcgttcactccggcgacagtgcttgctctctgccg
ccctactcgctgtcaaaagaggtgattgcagaggtcaagacccagaccaatgcgctggcc
aaggcgctgaatgtggtcggcctgatgaacatccagttcgcggtgaaacccgatgccgat
ggcaatgaggtgatctacctgattgaggtgaacccgcgtgcctcgcgcaccgtgccgttt
gtggcgaaatccaccgacagcgccatcgcctccatcgccgcccgcgtgatggccggtgaa
ccgctgtcgaatttccctaagcgtgcgccgtatgagccggatgccggctatgacgtcaac
gtgccgatggccgacccaatgacgttggcggatcccgacatgccctggttctcggtgaaa
gaagccgtgctgccctttgcccgcttccccggcgttgatacgctgctggggccggagatg
cgttccaccggtgaggtcatgggctgggaccgcagctttgcccgcgccttcctgaaggcg
cagatgggggccgggatggtgctgccctccgaagggcgcgcgttcatttcgatcaaggat
gctgacaagggcacattgatgctggatgcggcaaaaattctggtggaacagggctttacc
ctggtggcgacacgcggcactcaaagctggctggacggtcatggcgtgccctgcgagctg
gtcaacaaggtctatgagggccgcccccatgtggtcgatatgctgaaggacggcaacgtc
cagctgttgatgaacaccacagaaggcgcgcaggccgtgcaggacagcaaggacatgcgg
tccgtcgcgctctatgacaagatcccctatttcaccaccgccgccggcgccaatgccgcc
gcccgcgcgatcaaggcgcaggctgagggcgatgttgaggtgaagagcctgcagggctga
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