Phaeobacter piscinae: PhaeoP14_02571
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Entry
PhaeoP14_02571 CDS
T05105
Symbol
dnaE2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03030
DNA replication
ppic03430
Mismatch repair
ppic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP14_02571 (dnaE2)
03430 Mismatch repair
PhaeoP14_02571 (dnaE2)
03440 Homologous recombination
PhaeoP14_02571 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppic03032
]
PhaeoP14_02571 (dnaE2)
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_02571 (dnaE2)
Enzymes [BR:
ppic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PhaeoP14_02571 (dnaE2)
DNA replication proteins [BR:
ppic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PhaeoP14_02571 (dnaE2)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PhaeoP14_02571 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ATG40641
LinkDB
All DBs
Position
complement(2714061..2717573)
Genome browser
AA seq
1170 aa
AA seq
DB search
MTNAPRFIHLRTHTEYSLLEGALRLKKLPDLCKKHEMPAIAVTDTNNLFAALEFSVGASG
AGVQPIMGCQVDLRFTEPAPGERPKPPAPLVLLAQSETGYEHLMKLNSCLYMREGSELAH
VTLEELAAHSEDVICLSGGPDGPVGRLLQMGQRPAAEALMQRLKEMFPDRLYVELQRHPG
EHGQPEAEQATERGHVEMAYAMDLPLVATNDVYFPNTEMYEAHDAMICIAEGAYVDQAEP
RRRLTAQHYFKSQEEMVALFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAELR
RIANEGLQQRLAVIPHAVSVEEYQERLDFELGIIEGMGFPGYFLIVADFIQWAKDHDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIKYV
QEKYGRDKVGQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKLIPVEGVKPMSIVDSLR
EEPRLREEAENEEVVDRLLKYGMQVEGLLRSAGTHAAGVVIGDRPLDALVPLYRDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFQSGRDLHVAADGTQLYDPPEGAE
NQINAIPLDDTVTYDLYSRAKTVAVFQVESTGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGLRKIQSVHPLIDHILEETQGIIVYQEQVMQIAQVMANYTLGGADLLRR
AMGKKIKEAMDAERPKFEKGAAENGVPAKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVKKGLRLPYVPPCVNRSEATFNVVKGE
LVYALGALKNVGVEAMRLVTAARRESGEDKPFATLFDFARRVDLKKVGKRPLEMLARAGG
FDQLDPNRRRVFESLGALVDYSSAVHDQRNSSQVSLFGEAGEDLPEPRLPGTPDWLPAER
LSEEFKAIGFYLSGHPLDDYMPALKRKDVMTLDEVTAKAERGPFMAKMAGVVAGRQERKS
ARGNRFAFAQLSDTSGGYEVTLFSEVLEKSREFLETGAKVVITAEATMESDQLKLLVRSV
GPVDAAIADAGRSSLRVYISQASAVATVAQVLEDAKSAARNAARGEVYMYLQDPGLPGDV
EMDLGQPFPINPQIKGALKSLDGVMDVEEI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgctccccgattcattcatctgcgcacccataccgaatattcgctcttggaa
ggcgcgctgcggctgaagaagctgccggatctctgtaaaaaacacgagatgcccgcgatt
gcggtgaccgacaccaacaacctgtttgccgcactggaattttccgttggggccagcggg
gccggggtgcaaccgatcatggggtgtcaggtggatctgcggttcactgagccggccccc
ggggagcggccaaaaccgcccgctccgctggtgctgctggcgcagagcgagaccggctat
gagcatctgatgaagctgaattcctgtctttacatgcgcgaaggcagtgagctggcgcat
gtgacgctggaggagcttgcggcgcattctgaagatgtgatctgcctcagcggcgggccg
gacgggccggtggggcggctgttgcagatggggcagcgtccggcggctgaagcattgatg
cagcggctgaaagagatgttcccggatcgtctgtatgtggagttgcagcgtcatcccgga
gagcatggccaaccagaggcggagcaggcgaccgagcgcggccatgtggaaatggcctat
gccatggatctgccgttggttgccaccaatgacgtctatttcccgaacacagaaatgtat
gaggcccatgacgcgatgatctgcatcgctgagggcgcctatgtcgatcaggccgaacca
cggcggcgtctgacggcgcagcattacttcaagagccaggaagagatggtggcgctgttt
gccgatctgcccgaagcgattgagaacacggtggagattgccaaacgctgcgccttcatg
gcgtatcggcgcgatccgatcctgccgaagtttgccgatgacgaggttgcagagttgcgc
cgcatcgccaatgaaggcctgcagcagcggctggcggtgatcccccatgcggtgagcgtc
gaggaataccaagagcggcttgatttcgagctgggcatcatcgaggggatggggttcccg
ggctacttcctgattgttgccgacttcatccaatgggccaaggatcacgatataccggtg
gggccggggcggggctccggtgcgggctccttggtggcctatgcgctgacgattaccgac
cttgatccgctgcgctattcgctgctgtttgaacgctttctgaacccggaacgggtgtcg
atgccggacttcgacatcgacttctgcatggatcgccgggaggaggtgatcaaatacgtg
caggagaaatatggccgcgataaagttgggcagatcatcacctttggtgcgctgttgtcg
aaggcggcggtgcgcgacatggggcgggtgttgcaaatgccctatggccaggtggaccgg
ctgtcgaagctgatcccggtcgagggcgtgaagccgatgtctatcgtggacagtctacgc
gaagagccgcggctgcgcgaggaggcggagaacgaagaggttgtcgaccggctgctgaaa
tacggcatgcaggttgagggactgttgcgatcagcgggcacccacgcggcgggtgtggtg
attggcgatcgaccgctggatgcgctggtgccgctttaccgcgatccgcgctcggacatg
cccgcgacccagttcaacatgaaatgggtggagcaggcagggctggtcaaattcgacttc
cttggcctaaagacgctgaccgtcattcagaacgcgatggatctgattttccagtcgggc
cgtgatctgcatgtggccgccgatggcacccagctttatgatccgccggagggggcggag
aaccagatcaacgccatcccgctggatgacacggtcacctatgatctctactcgcgggcc
aagactgtggcggtgttccaggtggaatccaccggcatgatggacgcgctgaagcgcatg
aaacccacctgtatcgaagacattgtggcgctggtggcgctgtatcgtccgggcccgatg
gagaacatcccggtctattgcgaggtgaagaacggcctgcgcaagatccagtcggtgcat
ccgctgatcgaccacatccttgaggaaacccagggcatcatcgtttatcaggaacaggtg
atgcagatcgcccaggtgatggcgaattacacgctgggcggcgccgacctgttgcgtcgc
gccatgggtaaaaagatcaaggaggcgatggacgccgagcgtccgaagtttgaaaaaggt
gcagcggaaaacggcgttccggccaagaaggcgtcggaagttttcgacctgctggagaaa
tttgccaactacggcttcaacaaatcccacgcggcggcctatgcggtggtcagctatcag
accggctggctgaaggcgaaccacccggtggagttcatggccggcgtcatgaactgcgat
atccatctgacggacaagctggcgatctacttcgaagaggtcaagaaaggcctgcgcctg
ccctatgtaccgccctgtgtgaaccgctcagaggcgacattcaatgtggtcaagggggag
ctggtctatgcgctgggcgcgctgaaaaacgtcggggtggaggcgatgcgtctggtgacc
gcggcgcggcgtgagagcggtgaggacaagccctttgccacgctgtttgattttgcccgc
cgggtggatctgaaaaaggtcggcaaacgcccgctggagatgctggcgcgggccgggggc
tttgatcagctggaccccaatcgccgtcgggtgtttgaaagcctcggcgcgctggtggat
tattcctccgccgtccatgaccagcgcaattccagtcaggtgtcgttgttcggtgaggcg
ggggaggatctgccagagccgcgtctacccggcaccccggactggctgcctgctgagcgg
ctgtcggaggagttcaaggcgattgggttctacctctcgggtcatccgctggacgactat
atgcctgcgctgaaacgcaaggatgtgatgacgctggacgaggtgacggccaaggcggag
cgcgggccgttcatggccaagatggccggtgttgtcgccggtcggcaggagcgtaaatcg
gcccgcggcaaccgctttgcctttgcccagctgtcggacaccagcgggggctatgaggtc
acgctattttctgaagtgctggagaaatcacgtgaatttctggaaaccggcgccaaggtg
gtgatcaccgcagaggccacgatggagagcgatcagctgaagctcttggtgcgctctgtc
gggccggtggatgcggcgattgccgatgcgggacgcagttcgctgcgggtctatatctcg
caggcgagcgctgtggcgacggtggcacaggtgctggaggatgccaaatccgccgcccgc
aacgccgcgcgaggggaggtttatatgtacctgcaggatcccggcctgcccggtgatgtt
gagatggatctgggccagcccttccccatcaacccccagatcaaaggcgcgctgaaatcg
ctggacggggtgatggatgtggaggagatttga
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