Phaeobacter piscinae: PhaeoP14_02798
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Entry
PhaeoP14_02798 CDS
T05105
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03030
DNA replication
ppic03430
Mismatch repair
ppic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP14_02798 (dnaX)
03430 Mismatch repair
PhaeoP14_02798 (dnaX)
03440 Homologous recombination
PhaeoP14_02798 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppic03032
]
PhaeoP14_02798 (dnaX)
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_02798 (dnaX)
Enzymes [BR:
ppic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PhaeoP14_02798 (dnaX)
DNA replication proteins [BR:
ppic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PhaeoP14_02798 (dnaX)
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PhaeoP14_02798 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_30
RuvB_N
AAA_5
AAA_22
AAA_19
AAA_14
AAA_16
SLFN-g3_helicase
AAA_24
Rad17
AAA_18
DUF815
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
ATG40852
LinkDB
All DBs
Position
2952748..2954586
Genome browser
AA seq
612 aa
AA seq
DB search
MSDTAGDTAGQAPDQGSGQYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIM
TGIRGTGKTTTARIIAKGMNCIGEDGQGGPTTEPCGKCEHCTAIMEGRHVDVMEMDAASR
TGVGDIREIIDSVQYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTE
IRKVPVTVLSRCQRFDLRRIEPEVMIALLQKIARAENAQIADDALALITRAAEGSARDAT
SLLDQAISHGAGETTADQVRAMLGLADRGRVLDLIDMILRGDAAAALTELSAQYAEGADP
LAVLRDLAEITHWVSVVKITPDAAEDPTVSPDERARGSQMAEALPMRVLTRMWQMLLKAL
EEVAAAPNAMMAAEMAVIRLTHVADLPTPEQLMRTLQDTPPSPPPSGHMNAPTGNSGGPS
GAPQGAGGYVPQQPGPQGGMPSGPQGGPTMSAGNGQATALAPQVDSALARYPSFEHVIEL
IRVKRDGLLLEYVKTYLRLVSYQPGRITIQPTDDAPKDLAARLGQQLQTWTHARWVISLA
NEGGGETITERDNAAENALRAEASTHPMVQAVLESFPKAKIKHIRTAEDLAAEVEADALP
EVEDEWDPFEEE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacagcaggcgacacagcaggccaagcaccggaccaagggtctggccaatac
caggttctggcacgcaaataccggcccgaaacctttgccgatctggtgggccaggacgcc
atggtgcggacgctgaaaaacgcctttgccgccgaccggattgcccaggccttcatcatg
acgggcattcgcggcaccggtaagacgaccaccgcacggatcatcgccaagggcatgaac
tgcatcggcgaggatggtcagggaggccccaccacggaaccctgcggcaaatgcgaacat
tgcacggcgatcatggaaggtcggcatgtcgatgtgatggagatggacgccgccagccga
acgggcgtgggcgacatccgcgaaatcatcgattcggtgcagtaccgcgcagcctctgcc
cgctataagatctacatcatcgacgaagtccacatgctgtcgacctccgccttcaacgcg
ctgttgaagacgctggaggaaccgcccgcacatgtgaaattcatcttcgcgaccacggag
atccgcaaggtaccagtgaccgtcctgtcgcgctgccaacgcttcgatttgcgccggatc
gagcctgaggtgatgattgcccttctgcaaaagatcgcgagggcagaaaacgcgcaaatc
gccgatgacgcactggcgctcatcacccgcgccgccgaaggctctgcccgcgatgccacc
tcgcttcttgatcaggcaatttcgcatggcgccggcgagacaaccgcggatcaggtccgc
gccatgttggggctggcggatcgcgggcgggtcttggacctcatcgacatgattctgcga
ggcgacgcggctgcggcgctgaccgaactcagcgcgcaatatgccgagggggccgacccg
ctggccgtcctgcgcgatctggccgaaatcacccattgggtgtccgtggtgaaaatcacc
cccgatgcggcggaagatcccactgtcagcccggatgagcgcgcccgtggtagccaaatg
gcagaggcgctgccgatgcgtgtcctgacgcggatgtggcagatgctgctgaaggcgctg
gaagaggtcgccgcagcccccaatgcaatgatggcggccgaaatggcggtgatccgccta
acccatgtggcagatctgccgacgcctgaacagctgatgcgcaccctgcaggatacgccg
ccgtccccgccacccagcggtcatatgaacgcgccgacggggaactctggcggaccatct
ggcgccccccaaggcgcaggcggttacgtccctcagcaacccggaccgcagggcggcatg
ccaagcggcccccagggcggaccaacgatgtcggcaggcaacggacaggcaaccgcgctc
gccccgcaggtagatagtgcgcttgcccgctatcccagctttgagcatgtgatcgaactg
atccgggtaaaacgcgacggtttgctgctggaatacgtgaaaacctacctgcgtctggtg
tcttaccaacccggccggatcaccatccagcccacggatgacgcgcccaaggatctcgcc
gcgcgtcttggccagcagttgcagacctggacccatgcccgttgggtgatctccctcgcc
aatgagggtggcggtgaaaccatcactgagcgcgacaacgccgctgagaacgccctgcga
gcggaggccagcacccacccgatggtgcaggcggttcttgagagcttccccaaggcgaag
atcaaacacattcgcacagcagaagatctcgccgccgaggtcgaagcagacgccctgccc
gaagtagaagacgaatgggatcccttcgaggaagagtga
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