Phaeobacter piscinae: PhaeoP14_02947
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Entry
PhaeoP14_02947 CDS
T05105
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppic03019
]
PhaeoP14_02947 (rnc)
03009 Ribosome biogenesis [BR:
ppic03009
]
PhaeoP14_02947 (rnc)
03036 Chromosome and associated proteins [BR:
ppic03036
]
PhaeoP14_02947 (rnc)
Enzymes [BR:
ppic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PhaeoP14_02947 (rnc)
Messenger RNA biogenesis [BR:
ppic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PhaeoP14_02947 (rnc)
Ribosome biogenesis [BR:
ppic03009
]
Eukaryotic type
90S particles
RNase
PhaeoP14_02947 (rnc)
Prokaryotic type
rRNA processing factors
PhaeoP14_02947 (rnc)
Chromosome and associated proteins [BR:
ppic03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PhaeoP14_02947 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ATG40997
UniProt:
A0A291FSM1
LinkDB
All DBs
Position
complement(3089003..3089689)
Genome browser
AA seq
228 aa
AA seq
DB search
MKLSKDMRAFETRIGYSFSQPALLVRALTHASVSSPNRQDNQRLEFLGDRVLGLVMATAL
LDTDKAATEGQLAPRFNALVRKETCADVARDIDLGAVLKLGRSETMSGGRRKLALLGDAM
EAVIAAVYKDGGFEAAQELILRLWGNRIGRVEADARDPKTTLQEFAQARGEQPPAYVLVE
RKGPDHQPEFTISVQLQDGTEGRATAGSKRQAEQAAAKLLLARLEQEK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactctccaaggatatgcgcgcgtttgagacgcggatcggctatagtttctcccag
ccggcacttctggtgcgggcgctgacgcacgcctcggtgtcgtctcccaaccgtcaggac
aatcagcggctggagtttctgggcgaccgggtgctggggctggtgatggccacggcgctt
ctggacacggataaggccgcgacagaggggcagcttgccccgcggttcaatgctctggtg
cgcaaggaaacctgcgcggatgtggcccgtgatatcgatctgggggcggtgctgaaattg
ggccgctccgagaccatgtccggtgggcggcgcaaactggcgcttctgggcgacgcgatg
gaggcggtgattgccgccgtctataaggatggcgggtttgaggcggcacaggagttgatc
ctgcggctctggggcaatcgcatcggccgggttgaggcggatgcccgcgaccccaagacc
accttgcaggaatttgctcaggcgcggggggaacagcccccggcctatgtgctggtggag
cggaaaggcccggatcatcagccggaatttacaatttccgtgcagttgcaggatggcacc
gaaggccgcgcaactgctggatcgaaacgtcaggccgaacaggccgctgccaaattactg
ttggcacgattggagcaagaaaaatga
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integrated database retrieval system
