Phaeobacter piscinae: PhaeoP14_03063
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Entry
PhaeoP14_03063 CDS
T05105
Name
(GenBank) Long-chain acyl-CoA synthetase (AMP-forming)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00061
Fatty acid biosynthesis
ppic00071
Fatty acid degradation
ppic01100
Metabolic pathways
ppic01212
Fatty acid metabolism
ppic02024
Quorum sensing
ppic04146
Peroxisome
Module
ppic_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PhaeoP14_03063
00071 Fatty acid degradation
PhaeoP14_03063
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PhaeoP14_03063
09145 Cellular community - prokaryotes
02024 Quorum sensing
PhaeoP14_03063
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppic01004
]
PhaeoP14_03063
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppic04147
]
PhaeoP14_03063
Enzymes [BR:
ppic01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PhaeoP14_03063
Lipid biosynthesis proteins [BR:
ppic01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PhaeoP14_03063
Exosome [BR:
ppic04147
]
Exosomal proteins
Exosomal proteins of breast milk
PhaeoP14_03063
Exosomal proteins of breast cancer cells
PhaeoP14_03063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
YwhD
Motif
Other DBs
NCBI-ProteinID:
ATG41104
LinkDB
All DBs
Position
complement(3200025..3201998)
Genome browser
AA seq
657 aa
AA seq
DB search
MAQTQSGAAGMMSLPALLERNAAQIGDRQAYREKEFGIWQCWTWSETQKEIEALALGLIN
LGVNEGDFIAIIGRNRPSLYWAMVAAQSVGAVPVPLYQDAVAEEMSYVLDHCGARFVIAG
DQEQVDKVLEVQEQLSNLEQIIYLDPRGMRKYDHHTLHEYAHVQEQGRAARDEWMPDLEA
RKAKLTYDSTCVMLYTSGTTGKPKGVVLSNRNVIESAKNSAEFDKLTAGENILSYLPMAW
VGDFIFSVGQAYWCGFCVNCPESADTMMTDLREIGPTYFFAPPRVFEGQLTSVMIRMEDA
STLKRKMFHHFLAHAKKVGGDILDGRPVGLMDRLKYKLGDLLVYGPLKDTLGYGRIRVGY
TAGEAIGPEIFDFYRSLGINLKQLYGQTEATVFITVQPDGEVRADTVGVPAPDVEIKIAD
NGEIFYRSPGTFVEYYKNPESTASTKDPEGWVATGDAGFFEEGSGHLRIIDRAKDVGKMA
DGAMFAPKYVENKLKFYPDILEVVLFGNDRDRCVAFINIDLTAVGNWAERNNIAYASYQE
LAGHPKVLQSIREHVETVNESVAQDVMLSGCQVHRFVVLHKELDADDGEMTRTRKVRRVV
VEDKYSDIITALYDGSSQISTRTEVTYEDGRKGEISATLDIIDAKVVPVTTQAVAAE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtggctcagacgcagtcgggtgccgcagggatgatgtccctgccggcgctgcttgaacgc
aatgcggcgcagattggtgaccgccaagcctatcgggaaaaggaattcggcatttggcaa
tgctggacctggtccgagacccagaaggaaatcgaggcgcttgcgcttgggttgatcaac
ctcggggttaacgagggggatttcatcgccatcatcggacgcaaccgtccatcgctgtac
tgggcgatggttgcggcgcaatcggtgggcgcggttccggtacctctctatcaggacgcg
gtcgccgaagagatgtcctatgttctggatcactgtggcgcacggttcgtcatcgccggt
gatcaggagcaggtggacaaggtgctcgaggttcaggagcagctgagcaatctggagcag
atcatctatctggatccgcgcggcatgcgcaaatatgaccaccatacgctgcatgaatat
gcccatgtgcaggagcagggcagggctgcgcgcgatgaatggatgcctgatctggaagcc
cgcaaggccaagctgacctacgacagcacctgcgtgatgctttacacttcgggcaccaca
ggcaagcccaagggcgttgttctgtccaatcgtaatgtgatcgaaagcgccaagaattct
gcggaatttgacaagctgacggcaggcgaaaatatcctgtcatatctgccgatggcctgg
gttggcgatttcatcttctcggtcgggcaggcctattggtgcggcttctgtgtgaactgc
ccagagagcgccgacaccatgatgacggacctgcgcgaaatcgggccaacctatttcttc
gcgccgccgcgtgttttcgaaggtcaactgaccagcgtcatgatccgcatggaagacgcg
agcacgctgaagcgcaagatgttccaccacttcctggcgcatgccaagaaggttggcggt
gacattctggatggtcgcccggtcgggctgatggaccggctgaagtacaagctgggggat
cttctggtctatggtccgctgaaggatacgctgggctatggccgcattcgcgttggctac
accgccggtgaggcgatcgggccggagatttttgatttttatcgcagcttgggcatcaac
ctgaaacagctctacggccagaccgaagcgacggtgtttatcaccgtgcaacccgatggc
gaggtgcgcgctgatactgtgggggttccggcccctgatgtggaaatcaagatcgcggac
aatggtgagattttctatcgctctcccggaacctttgtcgaatattacaaaaacccggaa
tccacggcctcgaccaaggatcccgagggctgggtcgccacgggggatgctggctttttc
gaagagggcagcggccaccttcggatcatcgaccgcgccaaggacgttggcaaaatggcg
gacggcgcgatgtttgcacccaaatacgtcgagaacaagctgaagttctatccggacatt
ctggaagttgtgctgttcggcaatgaccgggaccgctgtgtcgcctttatcaacatcgac
ctgacggcagttggcaactgggcggagcggaacaacatcgcctacgcctcctatcaggag
ctggcggggcatccgaaggtgctgcaatcgatcagggaacatgtcgaaacggtcaacgag
tcggtggcacaggatgtcatgctctcggggtgtcaggtgcaccgctttgtcgtgctgcac
aaagagctggacgctgacgatggcgagatgacccggacccgcaaggtgcgccgtgtggtg
gtcgaggataagtattccgacattatcacagcgctttacgatggctcctcgcagatttcg
acacgtacggaagtgacctatgaggatggccgcaagggtgagatcagcgccacgctggac
atcattgatgccaaggtcgtgccggttaccacgcaggcggtggctgcggaatga
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