Phaeobacter piscinae: PhaeoP14_03093
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Entry
PhaeoP14_03093 CDS
T05105
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppic
Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppic03016
]
PhaeoP14_03093
Enzymes [BR:
ppic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PhaeoP14_03093
Transfer RNA biogenesis [BR:
ppic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PhaeoP14_03093
Prokaryotic type
PhaeoP14_03093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ATG41134
LinkDB
All DBs
Position
3233653..3234576
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AA seq
307 aa
AA seq
DB search
MTLGYDMGRKRKGRDISGWLVVDKPAGLTSTAVVNKVRWAFDAKKAGHAGTLDPEATGVL
AVALGEATKTVPYITDALKAYTFTVRLGQATNTDDAEGEVIASSDTRPSDEDIVAALPQF
LGDIMQVPPKFSAVKIDGQRAYKLARDGEDIELAARPLWVEELILVDRPDADHVVLEMTC
GKGGYVRSIARDLGAALGCHGHVKCLRRIWSGPFDAEDGISLETLDEMAKSPDLDGYLRP
LEEGLADLPQLTCTPEGAAKLRNGNPGMVLASDVEYGEEAWASLDGLAVAVGHYKAGELH
PSRVFVR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacattggggtacgatatgggacgcaaacgcaaagggcgcgatatttccggctggctg
gtggtcgacaagcctgcggggctgacgtccactgcggttgtcaacaaagtccgctgggcc
tttgatgcgaagaaggcaggccatgccggcacattggatcccgaggcaaccggcgttctg
gcagtcgccctcggcgaagccaccaagaccgtgccttatatcaccgatgcgctgaaggcc
tacaccttcactgtgcggctcggtcaggcgaccaataccgatgacgccgaaggcgaagtg
atcgccagcagcgacacacggccaagtgatgaggacatcgtggcggcgctgccgcaattc
cttggcgatatcatgcaggtgccaccaaaattctcagcggtgaagatcgacggtcagcgc
gcttataagctggcgcgcgacggtgaagacatcgaactggccgcccgcccattgtgggtt
gaggagctgatcctggtggatcgtcctgacgctgaccatgtcgtgttggaaatgacctgc
ggcaaaggcggctacgtgcggtccatcgcgcgggatctgggtgccgcgcttgggtgtcac
ggccatgtcaaatgcctgcgccggatctggtcggggccgtttgacgcggaggatggcatc
agccttgagacgctggatgaaatggccaaatcgccggatcttgatggctatttgcgcccg
cttgaagaagggctcgccgatctgccgcagctgacctgcacacctgaaggcgcggccaag
ctgcgcaatggcaatcccggaatggtgctcgcctccgatgttgaatacggcgaggaagcc
tgggcctcactggatggtctggctgttgcggttggacactacaaagccggcgagctgcat
cccagccgggtcttcgtccgttag
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