Phaeobacter piscinae: PhaeoP14_03098
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Entry
PhaeoP14_03098 CDS
T05105
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase Pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PhaeoP14_03098 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppic03019
]
PhaeoP14_03098 (pnp)
03016 Transfer RNA biogenesis [BR:
ppic03016
]
PhaeoP14_03098 (pnp)
Enzymes [BR:
ppic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PhaeoP14_03098 (pnp)
Messenger RNA biogenesis [BR:
ppic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PhaeoP14_03098 (pnp)
Transfer RNA biogenesis [BR:
ppic03016
]
Prokaryotic type
tRNA degradation factors
PhaeoP14_03098 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
ATG41139
UniProt:
A0A291FSU4
LinkDB
All DBs
Position
3238809..3240947
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AA seq
712 aa
AA seq
DB search
MFNVTKKSMQWGEETLTLETGKVARQADGTVIATLGETSVMANVTFARQQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTLSGAPFMGPIAAARVGFEGGEYVLNPTVDDMQDLRLNPDQR
LDLVVAGTKDAVMMVESEAYELTEAEMLGAVKFAHEQIQPVIDLIISLAEDAAKEPFDFQ
PADYSELFAVVKAAGEEQMRAAFAITDKQERTAAVAAARDAIKASLTEEQLEDANLGSAL
KKLEAGILRGDVVKTGKRIDGRSTTDVRAIESETGMLPRTHGSALFTRGETQALAVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
PTDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEDDGSYA
ILSDILGDEDHLGDMDFKVAGTDKGITSLQMDIKVAGITPEIMEKALDQAKDGRLHILGE
MAKALSETNAFSVHAPRIETMQIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGVIKI
ASADGTAIQKAYDMIHSIVAEPEEGAIYTGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKIVDQETGEEIKAEKKEDAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgttacaaagaaatcgatgcagtggggcgaagagacgctcacactggagacc
ggcaaggttgcccgtcaggctgatggcaccgtgattgccaccctgggcgagacctcggtc
atggcaaatgtcacctttgcccgccagcaaaaaccgggtcaggacttcttccctctgacc
gtccactaccaggaaaaatactacgcggcgggcaaggtccccggtggttttttcaagcgt
gaagcacgccccaccgaaaaagaaacgctgactgcgcgtctgattgaccgtccgatccgc
ccgctgttcgtccccggcttcaagaacgaagttctggtgatgtgcaccgtgctgagccac
gatctggtcaacgatcccgacatggtcgcaatgatcgcagcctctgcggcgctgaccctg
tccggcgcacccttcatgggtccgatcgcagctgcgcgcgttggttttgagggcggcgaa
tacgttctgaacccgactgtcgacgacatgcaggacctgcgcctgaaccctgatcagcgt
ctggatctggttgttgccggcaccaaagatgccgtgatgatggttgaatccgaggcttac
gagctgaccgaagcagaaatgctgggtgcggtgaaatttgctcatgagcagatccagccg
gtgatcgacctgatcatctctctggcagaagacgcggcgaaagagccgtttgacttccag
ccggcggattattccgagctgttcgccgtcgtgaaagccgcaggtgaagagcagatgcgc
gctgcattcgcaatcaccgacaagcaggagcgcaccgccgctgttgccgctgcccgcgac
gcgatcaaagcctcgctgacagaagaacagctggaagatgccaacctcggttccgccctg
aagaagctggaagctggcattctgcgtggcgacgtcgtcaagaccggcaagcggatcgac
ggacggtcaaccacggacgtccgcgccatcgagtcggagaccggcatgctgccgcggacc
cacggttcggcgctgttcacccgtggcgaaacccaggcactggccgtgaccacgctgggc
accggtgacgacgagcagttcatcgacgcgctgcacggcaacttcaaatccaacttcctg
ctgcactacaacttccctccctactcggttggtgaagtgggtcgtgtcggctccccgggt
cgccgtgaaatcggtcacggtaagctggcatggcgcgcgcttcaggcggttctgcctgcg
ccgaccgacttcccctacaccatccgcgtggtgtcggagatcaccgaatcgaacggttcc
tcttcgatggcatccgtctgcggtggttcgctgtccatgatggacgccggcgttccgctg
aaggcaccggttgccggtgtggccatgggtctgatcctggaagacgacggctcctacgcg
atcctgtcggacattctgggcgacgaagaccacctcggcgacatggacttcaaagtggcg
ggtaccgacaagggtatcacctcactgcagatggacatcaaggttgcaggcatcacgcct
gagatcatggaaaaagcattggatcaggcgaaagacggccgtctgcacatcctcggcgaa
atggccaaggctctgtcggaaaccaacgcgttctccgtccatgcgccgcgcattgagacc
atgcagatcccgaccgacaagatccgtgaagtgatcggctccggcggtaaggtcatccgc
gagatcgtggaaacctccggcgcgaaagtcgacatcaacgacgacggcgtgatcaagatc
gcatcggccgacggcaccgctattcagaaggcctatgacatgatccactcgatcgtggca
gagccggaagaaggcgccatctacaccggtaaagttgtgaagatcgtcgacttcggcgcc
ttcgtgaacttcttcggcaagcgcgatggcctggtacacgtgtcccagatcgaaaaccgc
cgcctgaaccacccttcggacgttctgaaggaaggccaggaagtgaaagtgaagctgctg
ggttttgatgatcgcggcaaggtccgcctgtccatgaagatcgtggatcaggaaaccggc
gaagagatcaaggctgagaagaaagaagacgcagaataa
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