Phaeobacter piscinae: PhaeoP14_03139
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Entry
PhaeoP14_03139 CDS
T05105
Name
(GenBank) DNA polymerase 3-like protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic03030
DNA replication
ppic03430
Mismatch repair
ppic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP14_03139
03430 Mismatch repair
PhaeoP14_03139
03440 Homologous recombination
PhaeoP14_03139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppic03032
]
PhaeoP14_03139
03400 DNA repair and recombination proteins [BR:
ppic03400
]
PhaeoP14_03139
Enzymes [BR:
ppic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PhaeoP14_03139
DNA replication proteins [BR:
ppic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PhaeoP14_03139
DNA repair and recombination proteins [BR:
ppic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PhaeoP14_03139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ATG41180
LinkDB
All DBs
Position
3282328..3283356
Genome browser
AA seq
342 aa
AA seq
DB search
MKLSPREADGYFAKPDPGKTGLLIYGPDAMRVSLKRQQLLAALLGPTAEEEMRLTRMPAA
DLRKDPALLMDAMKAVGFFPGIRAVFVEDANDTAAPAVIAALEAWQQGDAQIIVTAGQLK
ATSKLRKAFEGHRNAYATGIYDDPPSRGEIERILGTARIRDVPGDSMSALVDIANEIGPG
DFSRMVEKLALYKYEDSTPLTLDDIQSIAPQSTEAAVDDMLNIVAEGRGAEIGPLMGRLQ
AQGTNAVTLCIGATRHFRTLYTIASDPGGPAQGIGRLRPPAYGKRRDRLLRQAQSWGAFK
LETALTLLTDTDLQLRSAGQTAPALALMERALIQLARLSRVG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgagcccgcgcgaggcggacggctattttgccaaaccggatccgggcaagaca
ggccttttgatctacggccccgacgccatgcgcgtctcgctgaaacgtcagcaattgctg
gcggcgctgcttggccccaccgccgaagaagagatgcgcctgacccggatgcccgcagcg
gatctgcgcaaggacccggcgttgctgatggatgcgatgaaggcggttggctttttcccc
ggcatccgtgccgtgtttgtcgaagacgccaatgataccgccgcccctgccgtgatcgcc
gcacttgaggcctggcagcaaggtgatgcgcagatcatcgtgacagccgggcaattgaaa
gccacctcgaagctgcgcaaggcgtttgaggggcaccgcaacgcctatgcgaccggcatc
tatgacgatcctccgtcacgcggtgaaatcgagcgtattctgggtacggcccgtattcgt
gatgtgccaggggacagcatgtctgcgctggttgatatcgccaatgaaatcggtcccggt
gatttttcccgcatggtggagaaactggcgctgtataaatacgaggacagcaccccgctg
acgcttgacgatattcagtccatcgccccgcaatcgaccgaagcggcagtcgacgacatg
ctcaatatcgtggccgaggggcgcggcgcagaaatcggcccactgatggggcgattgcag
gcccagggcaccaatgcggtgacactctgtatcggggcaacccgccattttcggacgctt
tacaccattgcctctgatcccggcggtccggcgcagggtattgggcgactgcgcccccct
gcctatggcaagcgccgtgacaggctgctgcggcaggctcaaagctggggtgcgttcaag
cttgaaaccgcgctcaccttgctgacggacaccgatcttcagctgcgctcggcagggcaa
accgctccggcgcttgccctgatggaacgggcgttgatccagctggcccgcctcagccgg
gtggggtag
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