Phaeobacter piscinae: PhaeoP14_03200
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Entry
PhaeoP14_03200 CDS
T05105
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00300
Lysine biosynthesis
ppic00470
D-Amino acid metabolism
ppic01100
Metabolic pathways
ppic01110
Biosynthesis of secondary metabolites
ppic01120
Microbial metabolism in diverse environments
ppic01230
Biosynthesis of amino acids
Module
ppic_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PhaeoP14_03200 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PhaeoP14_03200 (dapF)
Enzymes [BR:
ppic01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PhaeoP14_03200 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ATG41239
UniProt:
A0AAN1LBX9
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All DBs
Position
3344400..3345245
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AA seq
281 aa
AA seq
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MPEMTIGSDTRLPFMKMHGLGNDFVVVDARDQTWDITPAMAEGIAHRQMGIGFDQLTVIT
KGDEDAHLTFYNADGSTSAACGNATRCIARHLLDESGKTHLRLTTDRGLLLAEDAGNGLT
SVNMGQPQLNWQDIPLAEDVDTLELPIEGAPTATGMGNPHCTFFVENAEVIPLAEFGARY
EHHPLYPERTNVQVAHVVAPDHLRMRVWERGVGITLASGSSSCATAVAAVRRGLTGRKVQ
IDLDGGTLWIDWREDGVWMTGPTMHVADGHFTRQFLESLSK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaatgaccataggatcagacacccgcttgccctttatgaaaatgcatggcctc
ggcaacgatttcgttgtggtggacgcgcgcgatcaaacctgggacatcaccccggccatg
gctgagggaatcgcccatcgccagatggggatcggatttgatcagctgacggtcatcacc
aagggcgacgaggacgcacatctgacgttctacaacgccgatggatcaacctccgccgcc
tgtggcaatgccacccgctgtattgcacgccatctgctggatgaaagcggcaagacccac
ctgcgcctgaccaccgatcgtggcctccttctggcggaagatgccggaaacgggctcacc
tccgtcaacatgggtcaaccgcagctcaactggcaggatatcccgctggccgaggatgtc
gatacgctcgaactccccatcgaaggggcgccgaccgccaccggcatgggcaacccgcat
tgcaccttttttgtggagaacgcagaggtgattccgctcgctgaatttggcgcccgctac
gaacaccacccgctgtatcccgaacgcaccaatgtgcaggtcgcccatgttgtcgccccg
gaccatctgcggatgcgggtctgggaacgcggtgtcggcatcacgctggcctccggctcc
tcctcctgcgcaacagccgtggccgctgtgcgtcgcgggctgacgggacgcaaggtgcag
attgatctggacggcggcacgctctggatcgactggcgcgaagacggcgtctggatgacc
ggccccaccatgcatgtggccgacggccatttcacccgccaattcctcgaaagcctctcc
aagtga
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